Gene Sde_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1593 
Symbol 
ID3965660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2048836 
End bp2050062 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content47% 
IMG OID637920674 
Productribosomal protein S32 
Protein accessionYP_527067 
Protein GI90021240 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3345] Alpha-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.5241e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA TTACACGTTT AGCGGCGTTA GTCGTCGCTG GCTTGTGCCT GCTAGGTACG 
CAGGCGCAGG CGAAAAAGTT TGAACACTTA GCCCAAACCC CGCCTATGGG GTGGAATAGC
TGGAACAATT TTGGCTGTGA TGTAGATGAA AAGCTCATCA AGGAAACGGC TGATTATATG
GTTTCTTCCG GCATGAAAGA CGCGGGATAT GAGTATGTAA ACATAGACGA TTGCTGGCAT
GGTGAGCGCG ATGCTAATGG TTTTATTCAG GCAGACCCCG AGCGGTTTCC TTCCGGTATT
AAAGCGCTTG CCGACTATGT TCATTCGAAG GGGCTGAAGT TTGGTATTTA TTCTGACGCG
GGTTGGACCA CCTGCGGCGG TAAACCGGGC AGTCGTGGGT ACGAGTTTCA AGATGCACAA
ATGTATGCGA AATGGGGCGT GGATTATCTT AAATACGATT GGTGCGCTAC AGATGGCTTA
AAGGCCGAAG GCGCATATCA AACAATGCGT GAAGCCATTC ATAAAGCCGG TAGACCAATG
GTATTTAGCA TTTGCGAGTG GGGCGACAAC CAGCCTTGGG AGTGGGCCAA ACCTATTGGG
CATCTATGGC GTACCACGGG TGATATCTAC AACTGTTTCG ATTGCGAATA TGACCACGGT
ACTTGGTCTT CCTGGGGTGT ATTGCAAATT TTGGATATGC AAGACGACCT AAGGCAGTAC
GCTGGGCCAG GCCATTGGAA CGACCCCGAT ATGATGGAGG TGGGCAATGG CATGACTGAA
GCTGAAGACC GTTCGCATTT TTCAATGTGG GCTATGTTGG CAGCGCCCCT TATTGCTGGT
AACGATATAC GCAATATGTC GGAAGCTACC AGAAAAATTC TCACCAATAA GGCCGTGATA
GCAGTCGATC AGGACGAGCT AGGCGTACAG GGCTTTAAAT ATTCCAGTAA AAATGGCGTA
GAGGTTTGGT TTAAACCGTT GGCGAATGAT GAGTGGGCAA TGGCTGTACT CAACCGAAAT
AAAGGTGAAG TTAAATTCGA GTTTAAGTGG CGTAATGAAG TGGTTAAAGA TGAGCTGACG
CATCGCACTA TTACGTTCAA CGAGCAAAAA TTTGACTGGC AAGATTTGTG GAATAAATCC
AACAAGGGCC ATACCAAAAA ATTCCTAAAA ACAAAAATAG CTGGGCACGA TACGCTGATG
TTTAGGCTAA CGCCGGCTAA AAACTAG
 
Protein sequence
MQKITRLAAL VVAGLCLLGT QAQAKKFEHL AQTPPMGWNS WNNFGCDVDE KLIKETADYM 
VSSGMKDAGY EYVNIDDCWH GERDANGFIQ ADPERFPSGI KALADYVHSK GLKFGIYSDA
GWTTCGGKPG SRGYEFQDAQ MYAKWGVDYL KYDWCATDGL KAEGAYQTMR EAIHKAGRPM
VFSICEWGDN QPWEWAKPIG HLWRTTGDIY NCFDCEYDHG TWSSWGVLQI LDMQDDLRQY
AGPGHWNDPD MMEVGNGMTE AEDRSHFSMW AMLAAPLIAG NDIRNMSEAT RKILTNKAVI
AVDQDELGVQ GFKYSSKNGV EVWFKPLAND EWAMAVLNRN KGEVKFEFKW RNEVVKDELT
HRTITFNEQK FDWQDLWNKS NKGHTKKFLK TKIAGHDTLM FRLTPAKN