Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1578 |
Symbol | infC |
ID | 3965108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2029145 |
End bp | 2029693 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920658 |
Product | translation initiation factor IF-3 |
Protein accession | YP_527052 |
Protein GI | 90021225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATTA GCAATCGTGA TAATGCCAAA GGGCGTTCAA AAAAAGCGAC TATCAACGAC CAAATTGAAG CGAAAGAAGT ACGATTAATT GGCGCGGATG GCGAACAAGT TGGGATCGTA CCCATCGCAG AAGCTCTAGC AACTGCGCAA GCTGCAACAC TAGATTTGGT ACTAATAGCC GCTGATGCAG ACCCCGTGGT CTGTAAAATC ATGGATTATG GTAAGCACCT TTTCGAAGCG AAAAAAGCAA AAGCTGCTGC TAAAAAGAAA CAAAAGCAGC AACAAGTTAA GGAAATGAAG TTTCGCCCCG GCACTGAAGA GGGCGATTAC AAGGTAAAGT TAAAAAACTT GCAGCGTTTC CTTGAGCAAG GCGACAAAGC AAAAGTTTCC CTGCGCTACC GCGGTCGAGA AATGGCTCAC CAAGAGTTAG GCATGGAGAT GATGAAGCGA ATAGAAGTGG ATCTTGCAGA AATAGGTACT GTTGAACAGT ACCCAAAAAT GGAAGGTCGC CAGCTAATAA TGGTTATCGC TCCTAAGAAG AATCGCTAA
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Protein sequence | MTISNRDNAK GRSKKATIND QIEAKEVRLI GADGEQVGIV PIAEALATAQ AATLDLVLIA ADADPVVCKI MDYGKHLFEA KKAKAAAKKK QKQQQVKEMK FRPGTEEGDY KVKLKNLQRF LEQGDKAKVS LRYRGREMAH QELGMEMMKR IEVDLAEIGT VEQYPKMEGR QLIMVIAPKK NR
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