| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1574 |
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| Symbol | |
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| ID | 3965102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2022949 |
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| End bp | 2023410 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920652 |
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| Product | trigger factor |
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| Protein accession | YP_527048 |
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| Protein GI | 90021221 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5608] Conserved secreted protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000227775 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACAC ACAAACGATT TTGGTTAGTA AAAAGCTGCT GGCTCGCAAT TGCGGCAACC
CTACTGTTAA TTAGTGGCTG CGCAACGCTA AATATAGAGC AACCAAAAGT ATCGGTAACG
CGGCTTGCAC CTGCCTCCTC TGGCTCTTCG CTGGGCACCC TTTTCGAAAT AGATTTGAAA
ATTGCTAACC CCAACGGTGT AGCGCTTCCT ATTAAAGGGA TGAGCTATTC GCTTGCCATT
AATGGCGCGG AGCTGTTATT TGGCACCAGC AATCAAATAC CCACTATTCC AGCCTATGGC
AGCGAAACGG TTACTCTACA GGTAGAGGCT AATTTACTTT CTGCACCCAA ATTATTTTTA
GCATTAAACA AAAGCAAAAC ATTGGACTAC ACATTTAAAA CTAAAATCGA TTTAAGTGGC
CCACTGCCAA CCATCAATGT GGTGGAGAGT GGCACGCTAT AG
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| Protein sequence | MNTHKRFWLV KSCWLAIAAT LLLISGCATL NIEQPKVSVT RLAPASSGSS LGTLFEIDLK
IANPNGVALP IKGMSYSLAI NGAELLFGTS NQIPTIPAYG SETVTLQVEA NLLSAPKLFL
ALNKSKTLDY TFKTKIDLSG PLPTINVVES GTL
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