| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1573 |
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| Symbol | |
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| ID | 3965101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2020305 |
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| End bp | 2022899 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920651 |
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| Product | thiolase |
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| Protein accession | YP_527047 |
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| Protein GI | 90021220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.142066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATA TTACTACCGT TATTACCAAT CTTTCGCTGC CAATAAATGA TGCTTTACCG
GCAATTGAAG CAACTTTACT AGCCAGTAAT GAACTAGTGT TGGAGGCGCC GCCTGGGGCA
GGTAAAACCA CGGTAGTACC CCTAGCTTTG TTGAATGCAC CTTGGCGCAA TGGCAAAAAA
ATTATTGTGC TTGAGCCGCG TAGGTTAGCC GCGCGCAATG CCGCCAGCAG AATGGCGTCG
CTGCTAGGTG AGCGCTGCGC CGAAACTGTA GGCTACCGAG TGCGCATGGA TAATTGCGTT
GGTGCAAATA CTGTAATCGA GGTGGTCACT GAGGGCGTTT TTACGCGCAT GTTGCAAGCT
GATCCCACAT TAGACGATGT GGCTATTGTT ATTTTTGACG AATTCCACGA GCGCAGCTTA
GATGCCGACT TAGGGCTAGC GTTATTGCAG CAATCCAACG TGCTGTATGG CGATATGCGC
GAGCAGCCTA TTAAAACCTT GGTTATGTCT GCCACATTAA ACGGTTCGCA ATTAAGCGAT
TACCTTGGTG GCGCGCCAGT GGTTACTAGT GAAGGGCGAA TGTTTCCTGT GGATGTAGCC
TACAGCGACC CTTACACCCC ACAGCAAGAT TCAGCCGCTC GCGCAGCGCA AGCAGTAAAT
AAAGCAATTG CTGAATATAA AGGCAGCATT TTGGTGTTTC TGCCGGGCAG AAAAGAAATA
GAAGCCTGCG CGCGCGCGCT GCGCAATTGG GTAGAGGCCG GTGAGCTGCC GAAGGCGTTG
GCAATATGCC CGCTGTATGG CGATCTTTCT TTAGCGGATC AACAGCAGGC AATAGCACCC
GCTGGCGCGG GGACAACCAA AGTTGTGCTA GCGACCAATA TTGCCGAATC CAGCCTTACC
ATTGAAGGGG TGAGCATAGT GGTGGATAGC GGCTTGCAAC GAGAGGCGCG CTACGACCCT
AACACAGGCA TGACCCGCTT GAACCTTTGC AGAATATCTA AAGCCAGCGC AGAGCAGCGA
GCGGGCCGCG CAGGGCGGTT AGAGCCTGGT GTTTGTATAC GCTTATGGTC TAAAAGCCAG
CAAAGTGAGT TGGCGCAGTA TGCTAGCCCA GAAATTCAAC ATGCCGACAT GGTGCCTTTG
GCTTTGCAGC TGCTGCAGTG GGGCGAAGCC GATTGTGCGC AAATTCCATG GTTGGATGCG
CCTGCGCCCG CAAGATATAC CCAAGCTATA GAGCTGTTAG AGCAGCTAGA GGCGTTAAAA
GATAACGGCG GGGGCATTAG CCTTACCGCG CTTGGCGAGG CGATGGCTGG CCTGCCTGTA
CACCCTCGTT TAGCGCATAT GTTGGTAGTG GCAAAGCAAT TGGCGCTGCA GGATTTAGCC
TGTACTTTGG CCGCACTTTT AAGCGAAAGG GATATTGGCA CAGCCAACAT GGGGGCAGAT
TTTTCTCGCC GTGTACATTG GTTGCTGCAG CCTCAAGGCG CCCCCAAGCA ATTGCAAGGC
GCGTTAAAGC GATTGAACGC GTTAAAAAAA ATGTTAGCCC AGCAGTTAAA CAGAGTGACA
AGCCCATCGC TTGAGCGTGC GCTAGCGGTA TCTGAGGTAA TTGTTTTATC GCAGCAAGAG
CAAATTGCGC TTTTGCTCGC GTGTGCTTTT CCAGACCGAA TTGCGCGAGC GAGAAAAAAT
AACCCCACCC AATACCTGTT GGCAAATGGT CGACAGGCCA ATTTATTTAA CGACGATAGT
CTCGTAGGTG AAGAATGGCT GGTGGTGGCA GAGGCTAGCA GTCAGCAAGG GCGCAGTAAC
GATATTATTC GGCTGGCGGC ACCCATTAGC CTTGCACTCT TACAACAGGC TTTTAGCGCA
AAGCTAGTAG AAAAAAATGT GTGCGAGTGG GATGAAAATG CAAACCGAAT AGTGAGCGAA
CAGCGCGTAG CGCTAGGGGC AATTATTTTA TCGGCAAAAC AACTCACACA AGCGGACCCT
GCTTTGCGTG TAGCGGCAGT GCGCGCGTTG ATAAATAAAA AAGGGTTAGG TGTATTGGAG
TGGACAGCAG ATGCCATCAA TTTGCGCGCT AGATTGCAGT TGTTGCACTC AGTGGACACA
AACTGGCCAA GCTGGAGCGA TGAGTTGTTA TTGGGGGCGA TTGATGATTG GCTTTCGCCT
TACCTGCACA GCGTAAACAC CGGTGCGGAT TTACGAAAAG TAAAAATTGC CGAGGCTTTA
ACAGCGACAT TGAGTTGGGA GCAGCAGGTA GAGCTAGATA AACTTGCGCC AGTCTCTTTT
TGCGTGCCCT CCGGCAGAGA TGTGCCCATC GACTATAGCC AAAACCCACC TGTTATAGCT
GCCAAGTTAC AGGAACTATT TGGCAGTGCC ATTGCGCCTA GTATTGTAAA TGGCAAGGTA
CCGCTACTTA TTCACTTACT GTCACCTGCT GGTAAACCTT TACAGGTAAC GCAAGATTTA
ATGAGTTTTT GGCGTGGGGC GTACACGGAA GTAAAAAAAG AAATGAAAGG GCGTTACCCT
AAACACCCTT GGCCAGACGA CCCTATAATG GCAATGCCCA CTCGCAAAAC TAAATCGCAG
TTAAGTAGAA CCTAA
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| Protein sequence | MVNITTVITN LSLPINDALP AIEATLLASN ELVLEAPPGA GKTTVVPLAL LNAPWRNGKK
IIVLEPRRLA ARNAASRMAS LLGERCAETV GYRVRMDNCV GANTVIEVVT EGVFTRMLQA
DPTLDDVAIV IFDEFHERSL DADLGLALLQ QSNVLYGDMR EQPIKTLVMS ATLNGSQLSD
YLGGAPVVTS EGRMFPVDVA YSDPYTPQQD SAARAAQAVN KAIAEYKGSI LVFLPGRKEI
EACARALRNW VEAGELPKAL AICPLYGDLS LADQQQAIAP AGAGTTKVVL ATNIAESSLT
IEGVSIVVDS GLQREARYDP NTGMTRLNLC RISKASAEQR AGRAGRLEPG VCIRLWSKSQ
QSELAQYASP EIQHADMVPL ALQLLQWGEA DCAQIPWLDA PAPARYTQAI ELLEQLEALK
DNGGGISLTA LGEAMAGLPV HPRLAHMLVV AKQLALQDLA CTLAALLSER DIGTANMGAD
FSRRVHWLLQ PQGAPKQLQG ALKRLNALKK MLAQQLNRVT SPSLERALAV SEVIVLSQQE
QIALLLACAF PDRIARARKN NPTQYLLANG RQANLFNDDS LVGEEWLVVA EASSQQGRSN
DIIRLAAPIS LALLQQAFSA KLVEKNVCEW DENANRIVSE QRVALGAIIL SAKQLTQADP
ALRVAAVRAL INKKGLGVLE WTADAINLRA RLQLLHSVDT NWPSWSDELL LGAIDDWLSP
YLHSVNTGAD LRKVKIAEAL TATLSWEQQV ELDKLAPVSF CVPSGRDVPI DYSQNPPVIA
AKLQELFGSA IAPSIVNGKV PLLIHLLSPA GKPLQVTQDL MSFWRGAYTE VKKEMKGRYP
KHPWPDDPIM AMPTRKTKSQ LSRT
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