| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1563 |
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| Symbol | |
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| ID | 3965091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2007491 |
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| End bp | 2008429 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920641 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_527037 |
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| Protein GI | 90021210 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAA ATGCATTAAA TTGCAATATA AAAAAAACGT TGGAACCTAT CATGCAGTTA
TATACCCACA CATTTAAAGC CATGGCTTCG CCTTGCACCC TTAAATTCTA CTGTAACGAT
ATTGTTGCAG CGCAAAAAAT ATTCCTAGCG GTAGAAGAGA AAACTCGCTT ATTCGAAAAA
CGGTATTCTC GCTACCTGCC CTTCAGCATT GTAAGCAAAA TAAACAATGC TAATGGCGAA
GCGATTAAAG TAGACGAAGA AACCGCAAAA CTTCTAAATT TTGCAACTGT TGCATGGAAA
ATTAGTGGGG GGTTATTCGA TATTACGTCG GGGGCATTCC GAACTGTATG GGATTTTAAA
AACGGTACCG TGCCTACATC TAAGCAGATT AAAAATGTGC TAGCGCTTGT GGGCTGGGAA
AAAGTTAAAT GGGATGGCGA AACATTACAA ATGCCCGCCG GTATGCAAAT AGATTTTGGC
GGCATTGTAA AAGAATACGC AACCGATGCC GCGCGCACTT TAGCAGAAAG CATGGGCGTT
GAGCATGGCC TAGTAGAGCT GGGGGGCGAT ATTAGCGTAA TAGGCCCACA TTTAGATGGC
TCCCCTTGGA AGATTGCACT ACAGCACCCA GACCATAAAG ATATAGACGT AGTGGTTGAA
ATTGGCCGTG GCTGCGTTGC GTCTAGCGGC GATTACGAAC GCTATTTTGA ACAAGATGGT
AAGCGCTACT GCCATATTAT CAACCCATTA AACGGCCAAT GTGCTCAAGG TGTTGCAGGT
GTGAGTGTAA TAGCGCCACA CTGCGTAATG GCCGGCACCA TAACCACCAC CGCACTCCTT
AAAGGCCCCC AATTCGCACT GGATTACCTA GCCGAGACAG GTTTGCATCA CCAATTATAT
TTACGCGACT ACACCGGCGA AGCAGTTTTA GCTAGCTAA
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| Protein sequence | MVKNALNCNI KKTLEPIMQL YTHTFKAMAS PCTLKFYCND IVAAQKIFLA VEEKTRLFEK
RYSRYLPFSI VSKINNANGE AIKVDEETAK LLNFATVAWK ISGGLFDITS GAFRTVWDFK
NGTVPTSKQI KNVLALVGWE KVKWDGETLQ MPAGMQIDFG GIVKEYATDA ARTLAESMGV
EHGLVELGGD ISVIGPHLDG SPWKIALQHP DHKDIDVVVE IGRGCVASSG DYERYFEQDG
KRYCHIINPL NGQCAQGVAG VSVIAPHCVM AGTITTTALL KGPQFALDYL AETGLHHQLY
LRDYTGEAVL AS
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