| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1554 |
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| Symbol | |
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| ID | 3965082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1998814 |
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| End bp | 1999659 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920632 |
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| Product | GTP-binding protein |
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| Protein accession | YP_527028 |
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| Protein GI | 90021201 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATTA ATTGGTATCC GGGCCATATG AATAAGGCGC GGAACAAAGT AAAAGAAATT
ATGCCCGCGG TGGATGTAGT TATTGAAGTG CTGGATGCGC GACTGCCAGC TTCGAGCACC
AACCCCATGA TAGAAACCCT GCGTGGCGAC AAACCCTACC TAAAGGTGCT GAGTAAATCG
GACCTCGCTG ACCCTACTAT TACTAAGGCT TGGCAGGCGT TTTTTCGCGA GCAGCGCAAT
ATGGATTCCT TGGCGATTAC TACCGATAAG GTATCCATAG CCAAAACTAT CCCCGATCGT
ATTCGCAAGC TATTACCTAA TAGGGGCACG TCTTTAAAGC CCATTCGCGC ATTAATTATG
GGTATTCCCA ATGTGGGTAA ATCCACCCTT ATTAATACGC TGGCGGGCAA AAAAATTGCA
CCGGTTGGCA ACGAGCCTGC GGTAACCAAA GCGCAACAAA AAATACGTAT TTCCGATAAC
TTCTTTTTAA TAGACACCCC AGGAATGACC TGGCCTGGCT CTAAAAACGA AATGATCAAT
TACCGGTTGG CGGCTAGTGG TGCCATACGC GATACCGCAT TGGAGTACGA TGATTTAGCG
GTATTCGCTA TGGATTACAT GCTGCAACGC TACCCAGAGG CAATACGCAA ACGCTACCAG
TTTGATGAGC TTTGTGAATC GGCCACGGCA ATGCTAGAAG AGTTAGCCAT GAAGCGGGGC
TGTAAGAAAA ACGGTTTGCC CGACTTAACC CGTATTGGCG AATTGTTTGT ACGCGAGCTG
CGCGCAGGTA AATTGGGGCG GTTCAGCCTA GAAGAACCTT TGGTAAGCTA TAGAAAAAGA
GAGTAA
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| Protein sequence | MLINWYPGHM NKARNKVKEI MPAVDVVIEV LDARLPASST NPMIETLRGD KPYLKVLSKS
DLADPTITKA WQAFFREQRN MDSLAITTDK VSIAKTIPDR IRKLLPNRGT SLKPIRALIM
GIPNVGKSTL INTLAGKKIA PVGNEPAVTK AQQKIRISDN FFLIDTPGMT WPGSKNEMIN
YRLAASGAIR DTALEYDDLA VFAMDYMLQR YPEAIRKRYQ FDELCESATA MLEELAMKRG
CKKNGLPDLT RIGELFVREL RAGKLGRFSL EEPLVSYRKR E
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