| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1529 |
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| Symbol | |
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| ID | 3965057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1973009 |
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| End bp | 1973512 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920607 |
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| Product | hypothetical protein |
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| Protein accession | YP_527003 |
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| Protein GI | 90021176 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGCA TACATAAAAA GTTAAGTCGA GTTAGAAAGC CTCGGGTTCA CATTAGTTAC
GATGTGGAAA CCGAAGGGGC TACAGTACAA AAGGAATTGC CATTTGTTGT AGGCGTAATG
GGCGATTTTT CTGGCGACCC AACTGCACCG TTAAAAGCGT TAAAAGATCG CCGGTTTGTG
CAGATAGACC GAGATAATTT TGATGAAGTG CTTAAAAGCA TGACTCCAGG ATTGTCAATT
CAAGTAAATA ACACCTTGAA AAACGACGGC AGCCAATTCG CGGTAGATTT GAAATTTGAA
TCTATGGATG ACTTTGAACC AGGCGCCATT GTGAACCAGG TAGAGCCACT TAAAAAATTG
TTGGATACGC GTAATAAATT ACGCGACTTA TCAACCAAAG CAGACCGTTC TGAAGAATTA
GAAGGCATTT TAGAGCGTAT ATTGAATAAC GAAGCTGATC TTGGCGAATT AGCCGAAGCG
GTTGGCGCAG ACAAGGAGTC CTAA
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| Protein sequence | MESIHKKLSR VRKPRVHISY DVETEGATVQ KELPFVVGVM GDFSGDPTAP LKALKDRRFV
QIDRDNFDEV LKSMTPGLSI QVNNTLKNDG SQFAVDLKFE SMDDFEPGAI VNQVEPLKKL
LDTRNKLRDL STKADRSEEL EGILERILNN EADLGELAEA VGADKES
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