| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1524 |
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| Symbol | |
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| ID | 3965052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1965894 |
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| End bp | 1967231 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920602 |
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| Product | hypothetical protein |
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| Protein accession | YP_526998 |
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| Protein GI | 90021171 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGC ACAACAAAAT AGCGTGGATG GAAAGCCAAT ACTTATTCCC ACACCACTTC
CAGCAACAAG AACGCTATAT TGAAGCCACC ATAGAGCACC GCGCGAAAGC GATTAGACCA
TTTGTATGGG GCTTTGAAGC GCTCGAGCTT GACAGTACGC TACTAAACGA ACAGCGCATT
GCCCTCACAC GTGCAAGCGG CATAATGACT GATGGCTGCC CTTTCGATTT ACCTCATAAC
GCACCACTGC CAGCTCCAAT TCAAGTGGAT CAGCAGGTAA AAAATGAGCT TGTATACCTT
GTACTGCCAA TATACCAAGC GGGTTCGCGC TATGTTGAAA GCAGTAATGC AGGGGAAGGT
GTTGCACGAT ACCGGCTTCA AGAATTGGAA GTATTTGATT ACTGTTCAGA CAACAACAAT
GCTGAGCAAG TAGAAAGCGC CACATTACAG TTCAGGCTAG CACTAGAGCA CGAAAACCTA
GGTGGATTCA CCTGCTTACC TATCGCGCGA ATAGCGGAAG TCACGCAAGA AGGCGCCATA
ATTTTAGATA AGAAATTTAT TCCACCTGTA CTTTCTGTAA AAGCCAACCC GCTGCTTCAG
GGTTACCTAA GTGACATTAT TGGGATGCTG CACCAACGCG GTGACTTACT CTCACATAGG
TTTAATTCAG GCACTCAAGA TAATAATTCT GCAGCTATAG CCGACTTTAT GTTATTACAA
CTTATTAATG GCGCAGAACC GGCTCTACGC CACTTGAACA ATATTAAGAA AACACACCCA
GAAACCCTGT ATGCCAAACT GGTATCTCTA TCTGGAGAAC TAGCGACATT TACAACAAAG
TCTAAGCGCC CAGTTGACTT TGAACCCTAC AAGCATAACG ACCTATACAA ATGTTATTTG
CCTGTAATCG AAACCCTAAG TAAGCAGCTT AGCGTTGTAT TAGAGCAAAC CGCAATTTCT
CTGCCGATGG AGAAGCGCCA GTACGGTATT TATGTATCGC GCATTACCGA CCGTTCGCTT
CTATCTCAGT CACGATTTAT TTTGGCCGCC AAGGCTAATA TCAGTACTGA TCAACTGCGT
GCCCACTTGC CAAAACATGT AAAAATTGGC TCCGTAGAAA CCATTCGCGA CTTGGTAAAT
AACCAGCTAA CTGGTATCAC CCTTACAAAT CTCGCCATGG CACCTAGAGA GATTTCTTAT
ACCGCAGGGT TTGTGTATTT TGAGCTGGAC GCTCACGGCG AACAATGGCA ATCGCTCAAC
AACTCTGGTG GTTTCGCTTT TCATATTGCC GGCGATTTAC CGGAACTAGC CGTAGAATTT
TGGGCTATTC GAAACTAA
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| Protein sequence | MVKHNKIAWM ESQYLFPHHF QQQERYIEAT IEHRAKAIRP FVWGFEALEL DSTLLNEQRI
ALTRASGIMT DGCPFDLPHN APLPAPIQVD QQVKNELVYL VLPIYQAGSR YVESSNAGEG
VARYRLQELE VFDYCSDNNN AEQVESATLQ FRLALEHENL GGFTCLPIAR IAEVTQEGAI
ILDKKFIPPV LSVKANPLLQ GYLSDIIGML HQRGDLLSHR FNSGTQDNNS AAIADFMLLQ
LINGAEPALR HLNNIKKTHP ETLYAKLVSL SGELATFTTK SKRPVDFEPY KHNDLYKCYL
PVIETLSKQL SVVLEQTAIS LPMEKRQYGI YVSRITDRSL LSQSRFILAA KANISTDQLR
AHLPKHVKIG SVETIRDLVN NQLTGITLTN LAMAPREISY TAGFVYFELD AHGEQWQSLN
NSGGFAFHIA GDLPELAVEF WAIRN
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