| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1503 |
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| Symbol | |
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| ID | 3965031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1936009 |
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| End bp | 1938033 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920581 |
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| Product | ATPase |
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| Protein accession | YP_526977 |
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| Protein GI | 90021150 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000259399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000359173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAATCA TACGGTTGCT TGTTTTGTGT TTGGGGGTAG TAAGTTCTGT GGTTGCGGTA
GCTAGTAGCT CAGAGCCACA TGATGAAGGT AATGCATTAG AGAGTGCATT GTGGGATACG
TTAACTATTC CTGTGTGCTG GGAGAATCCA GAGGCTTTTC CTGTAGAAGA GCAAGCTTGG
GTAAGAAAAG CGGTTGAGCG TACTTGGGAG CAGGAGTCAT TAGTCCGCTT CACCGGTTGG
GGCGAGTGTG GGGCGAACGA TGATGGGATA CGTATTTTAG TGGATGATGT TGGGCCGCAT
GTTAAGCAGC TAGGCTCGCG TTTGGATGGC TATGTTAATG GCATGGTACT AAACCATACA
TTCCAAAATT GGGGCACCAG CTGCAGTTAC CGTCGTCAAT ATTGTGCAGA AGTGATTGCA
GTTCATGAGT TTGGTCATGC TCTAGGCTTT GCCCATGAAC AAAACAGAGA TGACACCGAT
GATATGTGCG CGGCCGAGGC GCAGGGTACT GACGGCGACA TTTATGTCGG CGCCTGGGAC
TTGGATTCGG TTTTAAACTA TTGCAACCCT GAGTGGAATG GCGCGGGCAA TCTAAGCGAT
ACCGATATAG AGATGGTTCA GCTGTTTTAC GGTCAGCCCA TTGAAACGTC TGGTAACGAG
CCTGTAGCTA TTTGTAGTGT TAGCGCCAGT TCAAGCGATG GCAATATTGC AGAAAATACG
CTAGACGGCG ATTACGCTAC GCGTTGGTCT GCAAACGGCG ACGGCGAGTG GATACAATTT
AATTTGTGTG AAAGCCAAGT CGCGGATCGT GTCGAGTTAG CTTGGTATAA GGGAGATACT
CGCTCAAGTA CCTTCTCTAT TGAGTATATA ACTACCGATG GTTACGTTTG GTATACCACG
CCTGTTCGTC GATATTCTTC CGGTGCTTCG CTAGGCTTGG AATCTGCGTC ATTTACTGCA
GCTGAAATTC AGTCCTTGCG TATTACTGGC TACGGCAACT CGTCTAACAC TTGGAATAGT
ATTACCGAAG CGGTAATTTA TACTCCAAGC GCTGGGCTAG ATTACCCTAA CTTAGTTGCA
CCTACAGATG TGGCGGCTAC GGTAACAGGG CAATCGCAAA TTACTATTTC ATGGGCAGAT
ACTAATAGCG AAGAAGAAAG CTATTTTGTT GAGGCGCGTA TTGGTGGCAA CGATTTTTTC
GCTATAGGTC TTACTGAGGC GAACGCAACA TCTTATACGC ATACCGACCT TATTGCTGAA
GGCCTTTACG AGTATCGTGT TACTGCCGTA AGCGGCATTA TTCGCTCAAA CTTTGCAGCT
GCAAGTGTAT ATTTTCAACC TGCAGGCGGC TCGCAGGCTA ATCTTGTGCG CCCAGAAAAC
TTCACTGTAA CAGCTAATGC GCAAGGGCAA ATAGCACTAA GTTGGGTGGA TGTAAGTGAA
GGCGAAGAGG GTTATACCTT AGAGTATAAG CTTAGTAGTG AAGCTGAATT TACTGTAATT
GAGCTAGCTG CGAATGCCGA TTCTGCAATT GTTAGCGATT TGGCTGCGGG TAGTTACTAT
TTTCGTGTAA GCAGTTATTT CGGCAACAAT GCTTCTGAAT ACAGCGAGCT TTTGGTTACT
GTGTTTGCAT CAGAAGCGAC TATTGTGCCG GTTGATGTTT ATGCATCTAG TGATGATGGC
AATGTGGCAA GCAATGTTTT TGATAATGAT TACTCTACGC GATGGTCGGC TTTTGGTGTA
GGTGAGAATT TAACCATTGC GCTGGGGGAT AATTATCTCG TTACCGATAT GCGCATAGCG
TGGTACAAAG GTGATCAACG TCAAACCCGC TTTCAGGTAG AGGTGAGTGA TGATAACCAA
ACCTGGGTGC AAGTGTTTGA TGGGATTAAC TCGGGTGAGT CGTTAAGTTT AGAGACGACG
TTTGGCGGTG ATTATCGCGC AAGCTATATT CGAATTATCG GTTTGGGTAA TGAGTTTAAT
AACTGGAACA GTATTACTGA GGTAAGCATT AAAGGGCACC TCTAG
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| Protein sequence | MKIIRLLVLC LGVVSSVVAV ASSSEPHDEG NALESALWDT LTIPVCWENP EAFPVEEQAW
VRKAVERTWE QESLVRFTGW GECGANDDGI RILVDDVGPH VKQLGSRLDG YVNGMVLNHT
FQNWGTSCSY RRQYCAEVIA VHEFGHALGF AHEQNRDDTD DMCAAEAQGT DGDIYVGAWD
LDSVLNYCNP EWNGAGNLSD TDIEMVQLFY GQPIETSGNE PVAICSVSAS SSDGNIAENT
LDGDYATRWS ANGDGEWIQF NLCESQVADR VELAWYKGDT RSSTFSIEYI TTDGYVWYTT
PVRRYSSGAS LGLESASFTA AEIQSLRITG YGNSSNTWNS ITEAVIYTPS AGLDYPNLVA
PTDVAATVTG QSQITISWAD TNSEEESYFV EARIGGNDFF AIGLTEANAT SYTHTDLIAE
GLYEYRVTAV SGIIRSNFAA ASVYFQPAGG SQANLVRPEN FTVTANAQGQ IALSWVDVSE
GEEGYTLEYK LSSEAEFTVI ELAANADSAI VSDLAAGSYY FRVSSYFGNN ASEYSELLVT
VFASEATIVP VDVYASSDDG NVASNVFDND YSTRWSAFGV GENLTIALGD NYLVTDMRIA
WYKGDQRQTR FQVEVSDDNQ TWVQVFDGIN SGESLSLETT FGGDYRASYI RIIGLGNEFN
NWNSITEVSI KGHL
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