Gene Sde_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1502 
Symbol 
ID3965030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1934899 
End bp1935672 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content42% 
IMG OID637920580 
Producthypothetical protein 
Protein accessionYP_526976 
Protein GI90021149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0114999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000875087 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAACTT TTATCAAAGC AATTATTGCA GCCGCGGCAT TACACAGCGC TACAGCAGCA 
GCCATTACAA ATATGGAGTA TCTTCACAAA CAAGGTGAAC AAGATGGGTT ACACGGGAAT
ATTGAATTAT CTTTAAAAGG CAAATCGGGT AACAGTAACA GGCAAACCCA CAGCATAGCT
GGCCAACTTA GCTACCGAGC AGGTGCACAC CAATGGCTAA CATCAGCAAG TGCAGAATAC
GGTGAAAGTA ATAAAGTTAA AGATACAGAT AATAAATTTA TCCATCAGCG TTACATTCAC
CACAACTCCA ACAAGCTAGC CATTGAAGGA TTTGTGCAGT ACCAAGAGGA TACATTTAAG
CTTTTGGATT CCAGAGCACT TATTGGTGCA GGCGCCAGAT TTAAAGTATC GCAAAAAGAC
GACGATTACT TATTTAATTT TGGATTAGGC GCATATTACA CCCAAGAAGT ATACAACCTG
CCAGAAACCG CAACCGACGA AGAGCGCGAA GAACAATATG CCCGCGCCAA CAGCTATATA
AATTACGCCA AACAGCTTAC CCAAAGCACA TCGTTCAGCA ACACACTTTA CTGGCAGCCT
CGCTTAGGCG ACATTGCCGA TAGCTACGCG TATAACAACC TTGCGTTTAC CGTAAAAATT
AGTGAAAAAC TCGCATTAAA AGTTACCCTA GAAACGCAAT ACGATAGCAA ACCAGTAGGC
GAGTTAGAGC ATGTAGATCA CTCTTACTTC ACCTCTTTGG CATACAACTT TTAA
 
Protein sequence
MRTFIKAIIA AAALHSATAA AITNMEYLHK QGEQDGLHGN IELSLKGKSG NSNRQTHSIA 
GQLSYRAGAH QWLTSASAEY GESNKVKDTD NKFIHQRYIH HNSNKLAIEG FVQYQEDTFK
LLDSRALIGA GARFKVSQKD DDYLFNFGLG AYYTQEVYNL PETATDEERE EQYARANSYI
NYAKQLTQST SFSNTLYWQP RLGDIADSYA YNNLAFTVKI SEKLALKVTL ETQYDSKPVG
ELEHVDHSYF TSLAYNF