Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1502 |
Symbol | |
ID | 3965030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1934899 |
End bp | 1935672 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637920580 |
Product | hypothetical protein |
Protein accession | YP_526976 |
Protein GI | 90021149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0114999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000875087 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAACTT TTATCAAAGC AATTATTGCA GCCGCGGCAT TACACAGCGC TACAGCAGCA GCCATTACAA ATATGGAGTA TCTTCACAAA CAAGGTGAAC AAGATGGGTT ACACGGGAAT ATTGAATTAT CTTTAAAAGG CAAATCGGGT AACAGTAACA GGCAAACCCA CAGCATAGCT GGCCAACTTA GCTACCGAGC AGGTGCACAC CAATGGCTAA CATCAGCAAG TGCAGAATAC GGTGAAAGTA ATAAAGTTAA AGATACAGAT AATAAATTTA TCCATCAGCG TTACATTCAC CACAACTCCA ACAAGCTAGC CATTGAAGGA TTTGTGCAGT ACCAAGAGGA TACATTTAAG CTTTTGGATT CCAGAGCACT TATTGGTGCA GGCGCCAGAT TTAAAGTATC GCAAAAAGAC GACGATTACT TATTTAATTT TGGATTAGGC GCATATTACA CCCAAGAAGT ATACAACCTG CCAGAAACCG CAACCGACGA AGAGCGCGAA GAACAATATG CCCGCGCCAA CAGCTATATA AATTACGCCA AACAGCTTAC CCAAAGCACA TCGTTCAGCA ACACACTTTA CTGGCAGCCT CGCTTAGGCG ACATTGCCGA TAGCTACGCG TATAACAACC TTGCGTTTAC CGTAAAAATT AGTGAAAAAC TCGCATTAAA AGTTACCCTA GAAACGCAAT ACGATAGCAA ACCAGTAGGC GAGTTAGAGC ATGTAGATCA CTCTTACTTC ACCTCTTTGG CATACAACTT TTAA
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Protein sequence | MRTFIKAIIA AAALHSATAA AITNMEYLHK QGEQDGLHGN IELSLKGKSG NSNRQTHSIA GQLSYRAGAH QWLTSASAEY GESNKVKDTD NKFIHQRYIH HNSNKLAIEG FVQYQEDTFK LLDSRALIGA GARFKVSQKD DDYLFNFGLG AYYTQEVYNL PETATDEERE EQYARANSYI NYAKQLTQST SFSNTLYWQP RLGDIADSYA YNNLAFTVKI SEKLALKVTL ETQYDSKPVG ELEHVDHSYF TSLAYNF
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