Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1496 |
Symbol | gltX |
ID | 3965233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1927352 |
End bp | 1928863 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920573 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_526970 |
Protein GI | 90021143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0223173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTAC GCACCCGAGT CGCGCCATCG CCCACCGGCG ACCCCCACGT AGGCACAGCC TACATCGCGC TGTTTAACCT GTGCTTTGCC CGTAAACACG GCGGCCAATT TATATTGCGT ATAGAAGACA CCGATCAAAG CCGGTCTACG CCTGAATCTG AACAGGCCAT TTTAGATTCT TTACGTTGGT TAGGTTTAGA GTGGGACGAA GGCCCAGACG TTGGCGGAGC TGCAGGCCCA TATCGTCAAA GTGAGCGCAA AGAAATATAC GCCCAATACG TGCAGCAGCT GCTGGATGCA GGCCATGCCT TTAAATGCTA CCGCACCACC GAAGAGCTAG ATATGTTGCG TGCCGCACGT AAAGAAGCGG GCATACACTC AGCGCTTAAG CAAAGCGATC TAATGCTAAC CGAGCAAGAG CAAGCCGAGC GCGAAGCCGC CGGTATTCCC TATGTGGTAC GCATGAAAGT GCCAGAAGAA GAGGGCGCCT GCCAAGTAAC CGATTTGTTG CGCGGTAATA TCGATTTAGA TTGGAGCATG GTTGATGCTC AAATTCTAAT GAAATCCGAC GGCATGCCAA CCTACCACTT GGCCAACGTG GTAGACGATC ACTTAATGAA AATTACCCAC GTTATTCGCG GTGAAGAGTG GATTAACTCG GCCCCCAAAC ACATATTGCT ATACCAATAC TTTGGCTGGG ATGTGCCCGT ATTTTGCCAC TTGCCGCTAC TGCGCAACCC AGATAAAACC AAGCTAAGTA AGCGTAAAAA CCCAACCAGT ATTCTGTATT ACAAGCAAGC AGGTTACTTG CCAGAGGCCT TAACCAACTA TTTGGGGCGT ATGGGCTGGT CTATGCCGGA TGAGAGCGAG AAGTTCTCTA TTCAAGAAAT GCTCAACCAC TTCGATATCG CCCGTGTATC GCTAGGTGGC CCAGTATTCG ATATAGAAAA GCTTAACTGG CTAAACGGCT TATGGATTCG TGAAGACCTA GACGACGCAG CATTGGCGCA GCGCCTAGTA GATTGGAAAT TCAACCAAGA TAACTTGCTA GCGGTTATTC CCCACGTTAA ACAACGTATG GAGACCCTAG GCGACTTTTT ACCCATGGTA AGCTTCTTAG CGGCAAATAC CCTAGGCATT ACCGAAGAGA GCTTTAAGGG TAATAAGCTA GACCTAGAAG ACCAGAAAAA GGTGCTGCAG TTTGCCCTGT GGCAGCTAGA TACCATGCGC ACATGGGAGC GAGACGACAT ATTCGCAACC CTAAAAGGCT TAGCCGATGG TATGGGTATA AAGCTAAAAG ACTTCTTGGC ACCGTTATTT GTGGCTATTT CTGGCTCTAC CGCGAGCTTT TCGGTAATGG ATGCCATGGT GCTACTGGGC AGCGACCTAA GCCGAGCACG TTTACGCGTA GCCGTAGAAG TATTAGGCGG AGCCGGTAAA AAGGTGCTTA AGCGCTACGA GAAAGAATTT GCGGCATTAT CGCAATTAAA CGAAGAAAGC GACGCGGAAT AG
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Protein sequence | MTVRTRVAPS PTGDPHVGTA YIALFNLCFA RKHGGQFILR IEDTDQSRST PESEQAILDS LRWLGLEWDE GPDVGGAAGP YRQSERKEIY AQYVQQLLDA GHAFKCYRTT EELDMLRAAR KEAGIHSALK QSDLMLTEQE QAEREAAGIP YVVRMKVPEE EGACQVTDLL RGNIDLDWSM VDAQILMKSD GMPTYHLANV VDDHLMKITH VIRGEEWINS APKHILLYQY FGWDVPVFCH LPLLRNPDKT KLSKRKNPTS ILYYKQAGYL PEALTNYLGR MGWSMPDESE KFSIQEMLNH FDIARVSLGG PVFDIEKLNW LNGLWIREDL DDAALAQRLV DWKFNQDNLL AVIPHVKQRM ETLGDFLPMV SFLAANTLGI TEESFKGNKL DLEDQKKVLQ FALWQLDTMR TWERDDIFAT LKGLADGMGI KLKDFLAPLF VAISGSTASF SVMDAMVLLG SDLSRARLRV AVEVLGGAGK KVLKRYEKEF AALSQLNEES DAE
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