| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1495 |
|---|
| Symbol | |
|---|
| ID | 3965232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1926656 |
|---|
| End bp | 1927219 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637920572 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526969 |
|---|
| Protein GI | 90021142 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0669321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCTG TTATTGATGC TTTATTAACC CGTCGCTCGG TTACCGCTAA AGACATGATT
GCCCCTGGGC CAAATCGCGA CCAATTAGAT GTAATTTTGA AAGCCGGTCA CCGCGTGCCA
GACCACGGCA AAATAGGCCC TTGGCGTTTT GTGGTGTTTG AAGGCGATGC GCGCGCGCGT
TTTGGCGACG CGCTAGCAAA AATTTTTGCT AGCAAAAACA CAGACGCCAG TGAAAAGTTA
CTCGCTTTTG AAGCCGATCG CTTTAACCGT GCCCCTTGCG TAGTAGCTGT TATAGCAGCC
CCTATTGAAC ATAAAGTACC CGAGTGGGAG CAGGTACTTT CTGCCGGTGC GGCGTGCATG
AATATGCTAC ACGCTGCCCA TGCACAAGGG TTTGTTGCCC AGTGGCTAAC CGAGTGGTAC
GCGTATGATG CCGATGTGGA TGCCCTACTC GGCCTGCAAG CAAACGAGCG TGTTGCTGGG
TATATTTATG TTGGCTCTGC CGCACAAGCG CCTAGTGAGC GAGAACGACC TGCGCTGGAA
GACAGGGTGA GTTATTTTGA GTAA
|
|---|
| Protein sequence | MHPVIDALLT RRSVTAKDMI APGPNRDQLD VILKAGHRVP DHGKIGPWRF VVFEGDARAR
FGDALAKIFA SKNTDASEKL LAFEADRFNR APCVVAVIAA PIEHKVPEWE QVLSAGAACM
NMLHAAHAQG FVAQWLTEWY AYDADVDALL GLQANERVAG YIYVGSAAQA PSERERPALE
DRVSYFE
|
|---|
| |