Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1466 |
Symbol | |
ID | 3966183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1890239 |
End bp | 1890946 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637920543 |
Product | NAD-dependent deacetylase |
Protein accession | YP_526940 |
Protein GI | 90021113 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAG CTAAGGATTA CAAACGCATT GTTGTACTTA CCGGCGCTGG GGTATCGGCC GAATCCGGGC TTAAAACATT TCGCGACAAT AACGGCCTGT GGGAAAACCA CAGAGTGGAA GATGTAGCCA CCCCCGAGGC CTATGCCCGC AACCCAGAGC TTGTGCAAAA GTTTTACAAT GCTAGACGCT CTCAATTACT TACAGCCGCA CAACCCAACA AAGCACACAC AGCATTGGGG GAATTCGAAC AACACTTCAG TGGCGAATTT TTACTGGTTA CCCAAAACGT AGATAACCTG CATGAGCTAG GTGGCAGTAA AAATTTAATT CATATGCACG GTGAGCTGCT AAAAGCGCGC TGCCCTGTGA GCGAAAAGGT AAGCGATTGC ACCAAAGACC TAACCGATCA ATCCCTGTGC GAGTGCTGCA CACCGCCAAA TTTATTGCGA CCGCATATAG TATGGTTTGG TGAAATGCCG TTAGCCATGG ATACTATCGA ACAGGCCCTG TGTGAATGTG ACCTATTTGT ATCTATTGGT ACGTCTGGCA ATGTTTACCC AGCAGCAGGG TTTGTAGAGC TAGCTGCCAG CTACGGCGCA ACCACGGTAG AATTAAATTT GGATGCCAGT GCAAATAGCC GAGCGTTTGA CACAAGCCTA CAGGGGCCGG CAAGTGAATT GGTGCCGCTG TTTTTTGCCT GCTCGTAG
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Protein sequence | MKQAKDYKRI VVLTGAGVSA ESGLKTFRDN NGLWENHRVE DVATPEAYAR NPELVQKFYN ARRSQLLTAA QPNKAHTALG EFEQHFSGEF LLVTQNVDNL HELGGSKNLI HMHGELLKAR CPVSEKVSDC TKDLTDQSLC ECCTPPNLLR PHIVWFGEMP LAMDTIEQAL CECDLFVSIG TSGNVYPAAG FVELAASYGA TTVELNLDAS ANSRAFDTSL QGPASELVPL FFACS
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