Gene Sde_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1466 
Symbol 
ID3966183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1890239 
End bp1890946 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID637920543 
ProductNAD-dependent deacetylase 
Protein accessionYP_526940 
Protein GI90021113 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAG CTAAGGATTA CAAACGCATT GTTGTACTTA CCGGCGCTGG GGTATCGGCC 
GAATCCGGGC TTAAAACATT TCGCGACAAT AACGGCCTGT GGGAAAACCA CAGAGTGGAA
GATGTAGCCA CCCCCGAGGC CTATGCCCGC AACCCAGAGC TTGTGCAAAA GTTTTACAAT
GCTAGACGCT CTCAATTACT TACAGCCGCA CAACCCAACA AAGCACACAC AGCATTGGGG
GAATTCGAAC AACACTTCAG TGGCGAATTT TTACTGGTTA CCCAAAACGT AGATAACCTG
CATGAGCTAG GTGGCAGTAA AAATTTAATT CATATGCACG GTGAGCTGCT AAAAGCGCGC
TGCCCTGTGA GCGAAAAGGT AAGCGATTGC ACCAAAGACC TAACCGATCA ATCCCTGTGC
GAGTGCTGCA CACCGCCAAA TTTATTGCGA CCGCATATAG TATGGTTTGG TGAAATGCCG
TTAGCCATGG ATACTATCGA ACAGGCCCTG TGTGAATGTG ACCTATTTGT ATCTATTGGT
ACGTCTGGCA ATGTTTACCC AGCAGCAGGG TTTGTAGAGC TAGCTGCCAG CTACGGCGCA
ACCACGGTAG AATTAAATTT GGATGCCAGT GCAAATAGCC GAGCGTTTGA CACAAGCCTA
CAGGGGCCGG CAAGTGAATT GGTGCCGCTG TTTTTTGCCT GCTCGTAG
 
Protein sequence
MKQAKDYKRI VVLTGAGVSA ESGLKTFRDN NGLWENHRVE DVATPEAYAR NPELVQKFYN 
ARRSQLLTAA QPNKAHTALG EFEQHFSGEF LLVTQNVDNL HELGGSKNLI HMHGELLKAR
CPVSEKVSDC TKDLTDQSLC ECCTPPNLLR PHIVWFGEMP LAMDTIEQAL CECDLFVSIG
TSGNVYPAAG FVELAASYGA TTVELNLDAS ANSRAFDTSL QGPASELVPL FFACS