Gene Sde_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1457 
Symbol 
ID3966174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1879567 
End bp1881318 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content48% 
IMG OID637920534 
ProductK+ efflux antiporter, putative (KEA1) 
Protein accessionYP_526931 
Protein GI90021104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAG CAGAACACAC ATCGATGACC ATTCCCTACC TGTACGAGAC CATCGCCTTT 
TTACTTACCG TTGTTATAGT TGTACCCCTA TTTAAACGTA TAAAAATGAG CCCTATTCTG
GGCTATTTAG CCGTAGGAGC TATTATTGGC CCTTACGGCG CAGCTGTTAT TCACGATGCT
AACGCCGTAC AACACTTCGC CGAACTCGGC GTGATAATTT TACTGTTTAC CATCGGTTTA
GAGCTTTCAT TTGCGCGCTT AAAAAGTTTC TCCAAGCTTA TTTTTGGCTT GGGAGCGGCG
CAAGTATTAG TAAGCGCAAG CATAATTAGC GGCTTAGCAT TTTGGTGGGG CAATACCATC
GAAGCGGCCG TTATTATCGG CTTGTGTTTG GCGCTTTCTT CCACTGCCAT GGTGATGCAG
ATTTTGCACG AGCGCAGCGA AAGTGCCACC ACCTATGGTC GAGCAAGCTT TGCCATTCTG
CTCTTTCAAG ATTTAGCCGT TGTCCCTATT TTAATTTTGC TCACCATACT CGGCGATACA
TCCAGTGGCG ATAGCAGCCT ATGGCTAACG GTGGGCAGCG CCCTTTTAAA GGCAGCCATC
ACTATTGGCT TTATTATTTT TGTGGGCCGC TTTTTGTTGA GTTTTTTATT CCGCCACGTC
GCCCGCTTGC GCAATATTGA TGTGTTTACC GCCCTTATGC TGCTGGTTAT TCTCGCCACC
TCTGTGATTA CCGGCCTTGC GGGCTTATCT ATGGCACTGG GTGCATTCCT CGCCGGCTTA
TTGCTCGCAG AAACCGAGTT TCGCCATCAA ATAGAAAGCG AAATCGCCCC GTTTAAAGGC
TTATTTTTAG GCCTGTTTTT TATGGGCGTG GGCATGAATT TAGACCTGGT TATGGCCTTC
GAGTACGGCG TATGGGTTGT ATTATCGGTT GTGGGTTTAC TAGCCTTAAA AGCAACCATT
GCCACACTAT TTGCACGCTT ATTTGGGTTA AGCTGGCAAG ATGCGCTGCG CACAGGCTTA
ATTGTTTCTG AAGCCGGTGA ATTTGCATTT GTGGTAATTG GGCAGGCAAC CTTAAGCTAC
CAACTTATTG AACCTAATAT TGGCCAATTT ATGGTGGTAG TTGCCGGCTT ATCGATGATT
TTCACCCCAT TTCTTGCCAT GTTTGGCAAG TGGCTGGCCG ATAAATACAA CCTGTCACAA
ACCCCTAACG CTGCGCCCGA TGCACTGCAC GACCACATAA TAATCGCGGG GTTCGGCCGC
GTTGGGCAGG CAGTAGCACA TATTCTTACG CAACAATCCA TCCCCTACAT TGCGCTCGAC
ACTAACGCAG ATGAAGTACG GCGCTTACAA AAACAAGGCG CACATATATT TTTAGGCGAC
GCCAGCAAGC AGGAAGTGCT GCATATGGCC AGTGTAGATA ACGCCAGCGT GCTGCTTGTT
ACCATGGATG ACTCCCACGC ATCCATTCGC ACAACCCATG GCGCACGCCA GCATCATCCA
GAATTAAAAA TTGTGGTGCG CTCCAAAGAC GAACAACATT CAACAGCACT ACTACACGCA
GGCGCCAATC AAGTTGTGCC AGAAACACTA GAAGCCAGCT TGCAGCTATG TGCACACACA
CTTCAAGCAT CGGGTATGAG TCGCGAAGAG GCTACAGCCT GTGTAGAAAT TGAACGTTCA
GAAGCTTACT CACGCTTGCT GCACGAGGCC AAAGCCATTG GCAATCAAAA CCCCGCTTGC
GACAAACCAT AG
 
Protein sequence
MMEAEHTSMT IPYLYETIAF LLTVVIVVPL FKRIKMSPIL GYLAVGAIIG PYGAAVIHDA 
NAVQHFAELG VIILLFTIGL ELSFARLKSF SKLIFGLGAA QVLVSASIIS GLAFWWGNTI
EAAVIIGLCL ALSSTAMVMQ ILHERSESAT TYGRASFAIL LFQDLAVVPI LILLTILGDT
SSGDSSLWLT VGSALLKAAI TIGFIIFVGR FLLSFLFRHV ARLRNIDVFT ALMLLVILAT
SVITGLAGLS MALGAFLAGL LLAETEFRHQ IESEIAPFKG LFLGLFFMGV GMNLDLVMAF
EYGVWVVLSV VGLLALKATI ATLFARLFGL SWQDALRTGL IVSEAGEFAF VVIGQATLSY
QLIEPNIGQF MVVVAGLSMI FTPFLAMFGK WLADKYNLSQ TPNAAPDALH DHIIIAGFGR
VGQAVAHILT QQSIPYIALD TNADEVRRLQ KQGAHIFLGD ASKQEVLHMA SVDNASVLLV
TMDDSHASIR TTHGARQHHP ELKIVVRSKD EQHSTALLHA GANQVVPETL EASLQLCAHT
LQASGMSREE ATACVEIERS EAYSRLLHEA KAIGNQNPAC DKP