| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1456 |
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| Symbol | |
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| ID | 3966173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1878275 |
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| End bp | 1879459 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920533 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_526930 |
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| Protein GI | 90021103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.712312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCT CCTTACATAA ACGGGCCGAA TCGCCCGTGC ACGCAGCCAT TGCCGGTGGC
GGCCTAATGG GCCGATTACT TGCGTGGCGC CTTACTGCTT TGGGCCATCG CGTATCTTTA
TTCGACGCGG GCTCGCTTTC TACCCCTCAC AATGCAGCAT ACACTGCAGC AGCCATGCTA
TCGCCCATGA GCGAAGTGGT TGTATCTGAG CGGGCAATTT ATGACATGGG GCTGCACTCC
ATGACACTGT GGGAAAGCTG GCTGGCAGAG CTACCAGCAC TATTTAAGCA CCTGTATAGC
AAGCGCGGTA GCGTTGTTGT GGCCCACCCA CAAGATGAGT CGGAATTACT TCAGTTTCAC
CAAGATTTGC AGCACCACTT GGGCGCGAAC AATCAAAGCC AGTGGCTTGC CCCGCACGAA
TTAGCCCAAC TCGAGCCTGA CTTACATTTT AGCCACGGTT TATACCTCCC CAACGAAGCG
GCGTTAAATA ACCGCGTGTT TCTCGATAAG TTACTCGAAT GGCTTATTGA CCATAATGTA
CAAATACACG CTAACACCCC TGTGCGCTTT GCGCCCGAAG CACAAATAGA CAACATAGAT
GCAAGCCAAT TTGATTTATG GTTTGACTGC CGTGGCGTTG GCGCAGGTAA AGAAAGGCAA
GTGCGCGGGG TGCGGGGTGA AGTTATTTGG GTAGAAACCG ACGAAGTAAA ACTGCACCGC
CCTATTCGGC TTATGCACCC CCGCTACAAA CTCTATATTG TGCCTAAGCC TAACAATCAA
TTTATTGTTG GCGCCACCGA AATAGAAAGT AATGATAACT CGCCCATGTC TGTGCAATCT
GCGCTGGAGT TATGCAGCGC CCTGTACACG CTCAACCCCG CATTCGCCGA GGCGCGCATA
GTAGAAATGG ACACAAATTT ACGCCCCGCG CTAATCGATA ATATGCCCTG TATTACCTTG
GCACAAGCTA ACTCAAGTAA TCGTACGCCA GTCATTCAAG CCAATGGCTT GTACAGGCAC
GGTTATTTAT TAGCGCCAAG TGCGGTGGAA TACGCTTTAC AACTAGCGGG CCTAGGCAGA
GCTAAATCAC CATTTGCCAG CCACTTTAAT CGCCGCACTT TAGACGCATA TACAACAAGC
CCTACAGCTA TTCAAACACC GAAGGCACTC GCACTGTATG ACTGA
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| Protein sequence | MNTSLHKRAE SPVHAAIAGG GLMGRLLAWR LTALGHRVSL FDAGSLSTPH NAAYTAAAML
SPMSEVVVSE RAIYDMGLHS MTLWESWLAE LPALFKHLYS KRGSVVVAHP QDESELLQFH
QDLQHHLGAN NQSQWLAPHE LAQLEPDLHF SHGLYLPNEA ALNNRVFLDK LLEWLIDHNV
QIHANTPVRF APEAQIDNID ASQFDLWFDC RGVGAGKERQ VRGVRGEVIW VETDEVKLHR
PIRLMHPRYK LYIVPKPNNQ FIVGATEIES NDNSPMSVQS ALELCSALYT LNPAFAEARI
VEMDTNLRPA LIDNMPCITL AQANSSNRTP VIQANGLYRH GYLLAPSAVE YALQLAGLGR
AKSPFASHFN RRTLDAYTTS PTAIQTPKAL ALYD
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