| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1417 |
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| Symbol | |
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| ID | 3968707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1836068 |
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| End bp | 1837321 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920494 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_526891 |
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| Protein GI | 90021064 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGG CTGGCAACGC TGTGAAAGGG TTTGATGTAG AAAAAATTCG CGAAGACTTT
CCTATTTTGC ATCAAGAGGT GAATGGTCAC CCGTTGGTGT ATTTGGATAA CGCCGCCACT
ACACAAAAGC CTAATGCGGT TATAGATGCT ATTAGCGATT ATTATCGCGG CTACAACTCC
AATGTACACC GCGGTGCCCA CGCATTAAGT GATAAAGCCA CAGCTGGCTT TGAAGGTGCA
CGCGATACTT TGGCGGCGTT TATTAACAGC CCAAGTCGCG AGCAGGTATT GTGGACTCGC
GGTACTACAG AGGCTATTAA CTTGGTGGCC TTTACTTGGG GTAAACAAAA CCTTGAAGCC
GGCGACCGAG TGTTGGTGTC TAATTTAGAG CATCACTCCA ACATTGTGCC GTGGCAAATG
GTAGCGCAAG AAAAAGGCGC AAGTGTTGTA GCTATTCCAG TTTCAGATAG CGGCGCAATC
GATTTAGATG CTTTTAAAGC CTTGTTAGTA AGTAATGAAG GCCCTGTTAA GTTTGTATCG
GTAGGGCATG TGTCTAATGC GCTCGGTACG GTAAACCCAG TGGAAGAGAT TGTGGCACTA
AGCCACGAAG TTGGTGCCAA AGTACTTATA GATGGCGCTC AGTCGGTTGG TCATTGGGCT
GTAGATGTAC AGGCGCTAGA CTGCGACTTT TTCGCTTTTT CTGGCCACAA AATGTTTGGC
CCAACAGGTA TTGGCGTATT GTGGGGTAAG CGCGACTTGC TCGAAGCAAT GCCGCCGTAT
CAGGGCGGTG GTGAAATGAT CGAGACAGTA AGTTTCGAAG GCACCACCTA CAATGCATTG
CCTTACAAAT ACGAAGCGGG CACGCCAGAT ATTGCCGGTG CTATTGGGTT GGCAGCCGCG
GTAGATTATT TAAATAGTTT TGATCGCGAA GCGGCAGTCG CTCACGAAAA TGATTTGTTA
CAGTATGCAT GGCAAAAAGC TGAAGGCTTT GCGGGGTTAA CTCGTGTAGG CACAGCGCCA
AAAGTTGCCG GCGTGTTTAG CTTTTTGTTA AATGGTGCGC ACCCTTCAGA TGTAGGCATG
CTAATCGATC AGCAGGGGGT GGCTGTGCGC ACAGGTCACC ATTGTGCTCA GCCTTTAATG
GCACGCTTAG GTATACCGGG CACTGTGCGA GCATCGTTTT CTTTTTACAA CAATCGCAAT
GATGTAGATC GATTGTTTGA AGCGCTAGAA AAAGCAAAAA CATTTCTTGT GTAA
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| Protein sequence | MMQAGNAVKG FDVEKIREDF PILHQEVNGH PLVYLDNAAT TQKPNAVIDA ISDYYRGYNS
NVHRGAHALS DKATAGFEGA RDTLAAFINS PSREQVLWTR GTTEAINLVA FTWGKQNLEA
GDRVLVSNLE HHSNIVPWQM VAQEKGASVV AIPVSDSGAI DLDAFKALLV SNEGPVKFVS
VGHVSNALGT VNPVEEIVAL SHEVGAKVLI DGAQSVGHWA VDVQALDCDF FAFSGHKMFG
PTGIGVLWGK RDLLEAMPPY QGGGEMIETV SFEGTTYNAL PYKYEAGTPD IAGAIGLAAA
VDYLNSFDRE AAVAHENDLL QYAWQKAEGF AGLTRVGTAP KVAGVFSFLL NGAHPSDVGM
LIDQQGVAVR TGHHCAQPLM ARLGIPGTVR ASFSFYNNRN DVDRLFEALE KAKTFLV
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