| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1394 |
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| Symbol | |
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| ID | 3968663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1805639 |
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| End bp | 1806973 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920470 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_526868 |
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| Protein GI | 90021041 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.534606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0533857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAC TTACACTACC GCCTTCTTCT CGTTTGCGCA GCAAAGAGTT TACCTTTGGT
GTTGCAACGT CGTCTTACCA AATTGAAGGC GGCATAGATT CTCGCCTGCC CTGTAATTGG
GATACGTTCT GTGAGCAGCC CAATACCATT ATTGATAACA CCAACGGCGC CATTGCTTGC
GACCACATAA ATAGATGGCA AGACGATATA GAACTTATTG CCAACCTAGG GGTAGATGCC
TACCGCTTTT CTATTGCGTG GGGCCGTGTT ATTAATTTAG ACGGCAGCCT CAATAATGAA
GGCGTTACAT TTTACAAAAA TATTTTAACT AAGCTTCGCG AAAAGAATTT AAAAGCTTAT
ATAACGCTAT ACCACTGGGA CTTGCCACAA CATTTAGAAG ATGCTGGCGG CTGGCTTAAC
CGCGATACCG CCTACAAGTT TCGCGACTAT GTAAACCTTA TAACCCAAGC GCTTGATGAC
GATGTATTTT GCTACACAAC GTTAAACGAG CCCTTTTGCA GTGCCTACCT TGGCTATGAA
ATTGGTGTAC ACGCACCGGG TATAAAAGAC TTAGCCAGTG GGCGCAAAGC CGCACACCAT
TTATTACTTG CCCATGGCTT AGCTATGCAA GTGCTGCGAA AAAACTGCCC CAATAGTTTA
AGCGGCATAG TGTTAAACAT GAGCCCTTGT TACGCCGGCA GCAACGCACA AGCAGATATA
GATGCAGCAA AACGCGCGGA CGATTTATTA TTTCAGTGGT ATGCACAACC GCTACTTACT
GGCTGCTACC CTGATGCAAT AAACAGCCTG CCAGACAATG CCAAACCACC TATTTGTGAA
GGCGACATGG CGTTAATAAG CCAACCTTTA GATTATTTAG GCCTTAACTA CTATACCCGC
GCAGTATTTT TTGCCGACGG TAATGGCGGT TTTACCGAAC AAGTACCTGA GGGTGTAGAG
CTAACCGATA TGGGCTGGGA AGTTTACCCG CAAGGCTTAA CCGATTTACT AATAGACCTA
AACCAACGCT ATACCCTACC CCCGTTACTT ATTACCGAAA ACGGCGCAGC AATGGTGGAC
GAACTTGTTA ACGGCGAAGT TAACGATATT GCCCGAATAA ATTATTTTCA AACCCATTTA
CAAGCGGTAC ACAACGCCAT TGAACAAGGT GTTGATGTAC GCGGTTATTT TGCTTGGAGC
CTAATGGATA ATTTTGAGTG GGCACTGGGT TACAGCAAAC GATTCGGTAT TACCTATGTA
GATTACCAAA CACAAAAGCG AACGCTAAAA GCCAGCGGCC ACGCATTTGC TGAGTTTGTC
TCGAGTAGGA GCTAA
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| Protein sequence | MNRLTLPPSS RLRSKEFTFG VATSSYQIEG GIDSRLPCNW DTFCEQPNTI IDNTNGAIAC
DHINRWQDDI ELIANLGVDA YRFSIAWGRV INLDGSLNNE GVTFYKNILT KLREKNLKAY
ITLYHWDLPQ HLEDAGGWLN RDTAYKFRDY VNLITQALDD DVFCYTTLNE PFCSAYLGYE
IGVHAPGIKD LASGRKAAHH LLLAHGLAMQ VLRKNCPNSL SGIVLNMSPC YAGSNAQADI
DAAKRADDLL FQWYAQPLLT GCYPDAINSL PDNAKPPICE GDMALISQPL DYLGLNYYTR
AVFFADGNGG FTEQVPEGVE LTDMGWEVYP QGLTDLLIDL NQRYTLPPLL ITENGAAMVD
ELVNGEVNDI ARINYFQTHL QAVHNAIEQG VDVRGYFAWS LMDNFEWALG YSKRFGITYV
DYQTQKRTLK ASGHAFAEFV SSRS
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