| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1338 |
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| Symbol | |
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| ID | 3965953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1733684 |
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| End bp | 1734844 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920414 |
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| Product | ribonuclease D |
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| Protein accession | YP_526812 |
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| Protein GI | 90020985 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGACG ATTTAGTAAA ACAGCCCATT CACTGGATAA GTACCGTCGA AGAATTGGAA
GAGTGCTGCG AGCGCTGGCA AAGTAAAAAG TTACTTGCTG TAGATACCGA ATTTATGCGC
AGCCAAACCT ATTACCCTAT TGCGGGGTTA ATTCAGGTTA ACGATGGCGA AGCTAATTAT
CTGTTAGACC CAACCACCAT CGATGATTTC TCGCCGTTTG CAGAGATTTT GGTCGACGAC
GATATTATTA AAGCCATTCA CTCATGCTCA GAAGATCTTG AAGTGTTTTA TCACTCTTTT
GGTTTTTTAC CGCAGCGTCT GTTTGATACG CAAATAGCCG GAGCTTTTGT TAATTTAGGC
TATTCCATGG GTTTTGCGCG CATGGTGCAA GGTGTCTTGG GGGTGGAGCT ACCCAAAACA
GAAACGCGTT CTGATTGGCT GCAGCGCCCT TTAAGTGTTG CGCAAAAACA CTACGCTGCA
TTAGATGTAG AATATTTGTA TTTATTGGCC GGTAAACTAC TCACAGAACT AAAGGCCAAA
GAGCGTTTAG ATTGGGTATT TGGTGAAGGC AAAACTATAG TTAAAAACTT TAGCGATAAC
CTCGACCCTA AGTTGAGTTA CTTACGCGTT AAAAATGCAT GGAAGTTAAA CGCCAAGCAG
TTAGCTATAT TTCAAAACTT GTGTGAATGG CGCGAGCTAA CCGCACAAAA GCGCGATAAA
CCGCGCAATA GAATTGTTAA AGAAAATACG CTTTTTGCCA TGGCTCTAAA ACGCCCTAAG
CATATATCGC AATTGCGTAA TTACGAAGGT ATGAGCGATC GGGTTATTCG CACCGATGGT
GAATATTTAC TGCGCCTTAT TGAGCGCGCA GACAAAATAG AAGCATCAGA TTTACCCGAG
TTGCTACCCA AGCCTCTTAC TTCTGCAGAA AATAAGCGCG TTAAAGCGTT GCGTGCAGAA
GTACAAAAAG TAGCAGATGA AATTGGTATT GCCTCAGAAA TACTGGCCCG TAAAAAAGAA
TACGACTATA TAGTGCGGGA TTACTTGGCC AGAGGCGAGT GGAGCTACCC TGAAGGCTTT
CCCCAATGGC GTCAAGCACT GCTAACCGAT TTAATAAACG AAACCATTAA AGTTGAACCC
GCAGATGAAG TTGATAGTTG A
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| Protein sequence | MADDLVKQPI HWISTVEELE ECCERWQSKK LLAVDTEFMR SQTYYPIAGL IQVNDGEANY
LLDPTTIDDF SPFAEILVDD DIIKAIHSCS EDLEVFYHSF GFLPQRLFDT QIAGAFVNLG
YSMGFARMVQ GVLGVELPKT ETRSDWLQRP LSVAQKHYAA LDVEYLYLLA GKLLTELKAK
ERLDWVFGEG KTIVKNFSDN LDPKLSYLRV KNAWKLNAKQ LAIFQNLCEW RELTAQKRDK
PRNRIVKENT LFAMALKRPK HISQLRNYEG MSDRVIRTDG EYLLRLIERA DKIEASDLPE
LLPKPLTSAE NKRVKALRAE VQKVADEIGI ASEILARKKE YDYIVRDYLA RGEWSYPEGF
PQWRQALLTD LINETIKVEP ADEVDS
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