| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1302 |
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| Symbol | mgsA |
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| ID | 3965323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1691995 |
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| End bp | 1692459 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920376 |
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| Product | methylglyoxal synthase |
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| Protein accession | YP_526776 |
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| Protein GI | 90020949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1803] Methylglyoxal synthase |
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| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000113114 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00562878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | TTGAAAAGTC GCACAGGCGC GCTACCCAGC CGAAAACAAA TAGCGCTAAT CGCGCATGAC
AACAAAAAAC AAGAGCTAAG TGACTGGGTG TGCACCCACA AGAAGGAACT AGAACAGCAC
GACCTTTTCG CAACTGGGAC AACCGGCTAT AAGCTAGCAG CCGAAACAGG CTTAAAGGTT
GAAAAGTATA TTAGCGGGCC CTTGGGTGGC GACCAGCAAA TAGGAGCCAA AATATCTACC
GGCGAAATAG ACGTGCTTAT TTTCTTTTGG GACCCGTTCG AGCCTATGCC TCACGACCCC
GATGTAAAGG CGCTATTGCG CATTGCAGCC GTATGGAACA TACCCGTAGC TTGCAACCCC
GCGTCAGCAG ACTTTGTTAT CACATCACCA CTCATCAAAC AGAGCTACGA GAGGCAAATC
CCCGATTACG AGGCTTATAT CGCCGAAAGA ACCAAAAAGC TCTGA
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| Protein sequence | MKSRTGALPS RKQIALIAHD NKKQELSDWV CTHKKELEQH DLFATGTTGY KLAAETGLKV
EKYISGPLGG DQQIGAKIST GEIDVLIFFW DPFEPMPHDP DVKALLRIAA VWNIPVACNP
ASADFVITSP LIKQSYERQI PDYEAYIAER TKKL
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