Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1274 |
Symbol | |
ID | 3965256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1633449 |
End bp | 1634585 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920348 |
Product | Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
Protein accession | YP_526748 |
Protein GI | 90020921 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000453292 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.267314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG TAATTGGGGT TGTACGAGAA AGTGCTCTGG GAGAATCCCG AGTAGCAATT GCGCCGGATG TTGTGCAAAA ACTTAATAAA CTAGGTGTTC AGGTTGTTAT GCAGCAGGGC GCTGGTGCGT CGGCTTTTTT GCCAGACGAA AAATACAAGC AAGATAATGT AACGCTGGTA GAAAGTGCGG CAGATGTATA CGCCAAAGCG AATTTATTCA TTCGTGTACA AACTCCTTCA CTCGATGAAA TAGCGCAAAT GCCTGAGGGC AGCTATTTGC TGGGCGCGTT GACGCCTCAT AAACACCTAG CAGAAATTAA AGCGTTAGCA GATAAAAAAA TAACCTGCTG GGCAACCGAA TATATTCCGC GTATTTCAAG AGCGCAAAGT ATGGATACGC TCTCTTCTCA GGCGGCGGTG GCTGGTTATG TTGGCGTTGT AAAAGCCGCG GGCTTAAGTG CGAAATTTTT TCCAATGCTA ACAACCGCTG CGGGCACTGT GCGGCCAGCC AAAGTATTGG TATTGGGTGC TGGTGTTGCT GGCCTGCAGG CTATAGCAAC GGCTAAACGC TTAGGTGCGG TTGTGGAGGC GTACGATATT CGTCCCGAAA CCAAAGAGCA GTGCGAATCG TTAGGCGCTA AGTTTATTGA TACTGGTGTG AATGCAGCAG GTGAGGGCGG CTATGCTCGT GAGCTGACTG CAGAGGAAGT TGTCAAGCAA ACAGAAATTG TTGATCAACA TATTGCGAAA GCCGATGCTG TTATCACAAC AGCTGCTATT CCTGGTCGAC CTTCGCCTAA ATTAATTAGC GCGAGTGCAG TAGCGAAAAT GCAACCCGGT GCGGTGATTA TCGACTTGGC TTCTGAGGGC GGTGGTAACT GTGAGCTGAC TAAACCCGGT GAAATTTACC AGCATGAAGG TGTTGTTATT TGTGGTGAAT TGAATGTGCC AGCACAGCTA GCGGTACATG CATCGGAAAT GTTTAGTAAA AATTTATTTA ACTTTATTTC CCCTTGGTTA AAAGACGCAC AGCTAGTAGT AGATTGGGAA GATGAAATTA TTTCTCAGTC CTGCTTGGTT AAAGAGGGCG AAGTAGTAAA TAGCCGTATA CAAACTCTGT TAGGAGGTGG GGCATGA
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Protein sequence | MKLVIGVVRE SALGESRVAI APDVVQKLNK LGVQVVMQQG AGASAFLPDE KYKQDNVTLV ESAADVYAKA NLFIRVQTPS LDEIAQMPEG SYLLGALTPH KHLAEIKALA DKKITCWATE YIPRISRAQS MDTLSSQAAV AGYVGVVKAA GLSAKFFPML TTAAGTVRPA KVLVLGAGVA GLQAIATAKR LGAVVEAYDI RPETKEQCES LGAKFIDTGV NAAGEGGYAR ELTAEEVVKQ TEIVDQHIAK ADAVITTAAI PGRPSPKLIS ASAVAKMQPG AVIIDLASEG GGNCELTKPG EIYQHEGVVI CGELNVPAQL AVHASEMFSK NLFNFISPWL KDAQLVVDWE DEIISQSCLV KEGEVVNSRI QTLLGGGA
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