Gene Sde_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1255 
Symbol 
ID3965237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1606383 
End bp1606706 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID637920329 
ProductRecA DNA recombination protein 
Protein accessionYP_526729 
Protein GI90020902 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000397669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCG TAGTGGGTGA CAACTGTATC AAATGCAAAC ACACCGATTG TGTGGAAGTT 
TGCCCGGTAG ACTGCTTCTA TGAAGGCCCT AACTTTTTGG TTATCCATCC TGATGAGTGT
ATCGATTGCG CATTGTGCGA ACCCGAATGC CCTGTGGACG CAATCTTCTC TGAGGATGAG
CTTCCAGATG ACCAGCAAGC CTTCCTAGAA CTGAATGCCG AATTAGCTGA AGTGTGGCCA
AACATCACCG AGAAAAAAGA TGCGCCAGCC GACGCTGAAG AATGGGATGG TGTAGAAGGT
AAACTGCAAT ACCTAGAGCG CTAA
 
Protein sequence
MTFVVGDNCI KCKHTDCVEV CPVDCFYEGP NFLVIHPDEC IDCALCEPEC PVDAIFSEDE 
LPDDQQAFLE LNAELAEVWP NITEKKDAPA DAEEWDGVEG KLQYLER