| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1247 |
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| Symbol | |
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| ID | 3968208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1598110 |
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| End bp | 1598805 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920321 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_526721 |
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| Protein GI | 90020894 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.281757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.77541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGGTTG GTATCCCTAA GCAATATTTA TTGCTGTGTG GCAAAACCAT TTTAGAGCAT
ACCCTTCACA AAATAAGTCA GGTAGAAAAC CTAAGCGGCA TCGTTTTAGT GCTAGACGCA
AACGACCAAT ACTGGCCCAC CCTTAACTGC AATAGCATTC CCAACCTGCA TGTGGTGAAT
GGCGGCGCTA GCCGTGCGCA ATCGGTTAAA AATGGGTTGA GCTATATAGC AAAACAAATA
GCCAATAACA CTGCCAATAA CACAGGCCAA GACCAAGAAG TAAAAGTGTT GGTTCACGAT
GCGGCACGCC CCTGTGTAAA TGTAAAAAAT ATAGAAACAC TTGTGGCGAG CTGTGAGCAG
GCGAACCAAG GTGGAATATT GGCAGCGCCC GTGGCAGATA CCGTAAAACG TGCGGTTGAA
CAGGGCGAGG CGCCTGCAGT GCAGGCAACA GTAGATCGCT CTTTGTTATG GCTAGCACAC
ACGCCGCAGT ATTTTGAATT GCACTGCCTA CTCAATGCGC TAAACCACTG CGAGCAAGCG
GGGCTAGAGG TAACCGATGA GGCATCTGCA ATTGAGCAAA CCGGTGGGCA GGTATTATTA
GTTGCCGACG GTAAAGACAA TATTAAAATA ACGCTGCCAG AAGATATGCT GGTAGCAGAA
GCAATTTTAG CGAATCAGTT AAAACAGGGT ACTTAG
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| Protein sequence | MGVGIPKQYL LLCGKTILEH TLHKISQVEN LSGIVLVLDA NDQYWPTLNC NSIPNLHVVN
GGASRAQSVK NGLSYIAKQI ANNTANNTGQ DQEVKVLVHD AARPCVNVKN IETLVASCEQ
ANQGGILAAP VADTVKRAVE QGEAPAVQAT VDRSLLWLAH TPQYFELHCL LNALNHCEQA
GLEVTDEASA IEQTGGQVLL VADGKDNIKI TLPEDMLVAE AILANQLKQG T
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