Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1245 |
Symbol | |
ID | 3968206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1596174 |
End bp | 1597460 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920319 |
Product | enolase |
Protein accession | YP_526719 |
Protein GI | 90020892 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0148] Enolase |
TIGRFAM ID | [TIGR01060] phosphopyruvate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00208241 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.787599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA TAGCTAACGT TATTGGTTTT GAAGTAATGG ATTCACGTGG TAACCCAACG GTTATGGCGG AAGTAGTATT GGAATCTGGT GTTGTAGGCA CTGCCTGTGC TCCATCAGGT GCATCTACAG GTTCGCGTGA AGCGTTGGAA TTGCGCGATG GCGATAAAAG CCGTTACTTG GGCAAAGGCG TATTAAAAGC CGTTGCTAAC ATCAACGAAA CCATCAAGCC ATTATTGGTT GGCAAAGATG TAGCCGCTCA GCGCGAGTTG GACGACATTA TGCTTAAAGC AGATGGTACC GAAAACAAAG CTAACTTGGG TGCGAACGCA ATTTTGGCAG TGTCTTTGGC TGCTGCAAAA GCTGCTGCAC AAGACAAAGG TATTCCTTTG TACGCACACA TTGCCGACAT TAACGGCACG CCAGGCAAAT ACACCATGCC TGTGCCAATG ATGAACATCA TCAACGGTGG TGAGCACGCC GATAACAACG TTGATATTCA AGAATTCATG ATTCAGCCTG TATCTGCGCC AAACTTCACC GAAGCATTGC GCATGGGTGC TGAAGTATTC CACAGCTTGA AAAAAGTATT GGCTGGCCGC GGCTTAAACA CTGCAGTGGG TGATGAAGGT GGTTTCGCTC CTAACCTTCC TTCTAACGAA GCCGCTCTTG AAGCCATTGC CGAAGCTGTT GCAGCTGCTG GTTACAAGTT GGGCGAAGAA ATTACCTTGG CCTTGGATTG TGCATCATCT GAATTCTACA AAGATGGCGT ATACGACATG TCTGGCGAAG GTAAAAAATT CTCTCCAGAA GAGTTCGCCG ATTACCTTGC AGAACTTGCT TCTAAGTACC CAATTTTGTC TATCGAAGAC GGTATGGACG AGAGCGATTG GGACGGTTGG AAAGTTCTTA CCGAGAAAAT CGGTAGCACT TGTCAGTTAG TGGGTGATGA CTTGTTCGTT ACCAACACCA AAATTTTGAA AGAAGGCATT GATAAGAGCA TTGCTAACTC GATTCTTATC AAGTTCAACC AAATTGGTTC TTTGTCTGAA ACATTAGACG CAATCAAAAT GGCGCAAGAA GCTGGCTACA CCGCAGTTAT TTCTCACCGT TCTGGCGAAA CCGAAGATAC CACTATTGCT GATTTGGCCG TGGCTACTGC AGCGGGCCAA ATTAAAACAG GTTCTTTGTC TCGTTCAGAC CGTGTTGCTA AATACAACCG TTTGTTGCGC ATTGAAGCTG AATTGGGTGA AAAAGCTCCT TACCGTGGCC GCGCTGAATT CAAATAA
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Protein sequence | MSKIANVIGF EVMDSRGNPT VMAEVVLESG VVGTACAPSG ASTGSREALE LRDGDKSRYL GKGVLKAVAN INETIKPLLV GKDVAAQREL DDIMLKADGT ENKANLGANA ILAVSLAAAK AAAQDKGIPL YAHIADINGT PGKYTMPVPM MNIINGGEHA DNNVDIQEFM IQPVSAPNFT EALRMGAEVF HSLKKVLAGR GLNTAVGDEG GFAPNLPSNE AALEAIAEAV AAAGYKLGEE ITLALDCASS EFYKDGVYDM SGEGKKFSPE EFADYLAELA SKYPILSIED GMDESDWDGW KVLTEKIGST CQLVGDDLFV TNTKILKEGI DKSIANSILI KFNQIGSLSE TLDAIKMAQE AGYTAVISHR SGETEDTTIA DLAVATAAGQ IKTGSLSRSD RVAKYNRLLR IEAELGEKAP YRGRAEFK
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