| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1213 |
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| Symbol | |
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| ID | 3967998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1557346 |
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| End bp | 1559091 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920287 |
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| Product | exonuclease RecJ |
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| Protein accession | YP_526687 |
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| Protein GI | 90020860 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATACTA AAGTTATCTC GCGTCGTTCA CTTCCCGATT CGCAAGTATT AAATAGTTCG
TTGGCAACAG TCGAAGATCT TATCAAGCAG CTATATGCCG CACGAGGTTA TAGCAGTGAT
AAGCCAACTC AGTACGCTCT AAGCGAAATG CTGCCGCCTA CAAATATGCG CGGTATTGCA
GAAGGCGCAA ATATTATTGA AGCAGCGCTG CGCACAGGTG AACGCATAGT GATTCTTGGC
GATTTCGATG CGGATGGGGC AACCAGTACA GCATTGGCTG TGCGATGTTT GCGGGCGATG
GGGGCACAGC ATGTGGATTA CTTGGTGCCT AATCGCTTTG AATTCGGCTA CGGCTTAACG
CCAGAAATTG TTGCGGTTGC TGCGAAGCTA AACCCCAATT TAATTATTAC GGTCGATAAC
GGTATTGCCA GCGTAGAAGG CGTTAATGCT GCTAATGCAT TAGGTATTAA GGTGCTGGTT
ACCGATCATC ACTTGCCGCC AGAGCAACTG CCAGACGCCG CCGCTATTGT TAACCCCAAT
CAAAAAGGCT GTGAATTTGG CAGTAAAAAT TTGGCGGGCG TGGGCGTGAT TTTCTATTTA
CTGTGCGCCT TGCGTTCGCA GTTACGCGCC AGTGGTTGGT TTGAGCAACG CGGTATAGAG
CCGCCTAATA TGGCGAGTTA CTTAGATTTA GTGGCACTAG GTACAGTAGC CGACGTGGTG
CCCCTCGATT TTAATAACCG CATTTTGGTG TCGCAGGGCA TTGCGCGTAT GCGCCAAGGG
GTATGTATTG CCGGTATTCG CGCCTTGTTT CAAGTTGGGG GGCGCAATAT AGAGCGAGTG
CAGTCCACCG ACTTAGGCTT TGTTGTTGGC CCAAGGCTAA ACGCTGCAGG TCGATTAGAC
GATATGTCGC TGGGTATTAA AATGCTGCTT ACCGATAACT ACACAGAGGC GTTGCATTTG
GCGGGTGAGC TGGACTCTTT AAACCGCGAG CGCCGCCAAA TAGAGGCTTC TATGCAGCAT
GAAGCGTTTA AGCTGCTTGA TGAATTGGCG CTAGATGGCG AGCAAACACC TATGGGGGTA
AGCCTTTATC AAGCTGACTG GCACCAAGGC GTTATTGGCA TTTTAGCCTC GCGTATTAAA
GATAAGCTGC ATCGACCTAC AATTGCCTTT GCCGATGCCA CGGACACAGA AATAAAAGGG
TCTGGCCGCT CGGTAGAGGG GGTGCACTTG CGAGATATTT TGGATCAAGT GGCAACTGAA
AACCCAGGCT TATTATCTAA GTTTGGTGGT CATGCAATGG CGGCTGGGCT GTCTTTGCCC
AAAGAGTCAT TCACCGCATT TGCCGAGGCG TTCGACCGCT GTGTGAGCGC TCATTTGGGG
GGCGAGGCGT TAACGGCCAA GGTTATTACT GACGGCGAAT TGCCGGCCCA TTTGATGGAT
TTGGCCACCG CCGAAGCAAT AGCCCATGCA GGGCCTTGGG GGCAGAATTT TCCCGAGCCA
TTATTCTATG GCGAGTTTTT GCTGGTTCAG CAGCGTATTG TGGGTGAAAA GCACTTAAAA
ATGGTGGTAA CCCCCAGTGA GTACTCTGGG TTAGCCATAG ATGCCATTGC TTTTAATGTT
GATGTAGCAA GTTGGCCAAA TAATAGTGTG GAGCGTGTGC GTTTAGCTTA TGTGCTTGAT
GTGAATGAGT TTCGCGGCAA TAAATCGTTG CAACTGCGCG TTGCTCATTT AGAGGCTCTC
ATTTAG
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| Protein sequence | MNTKVISRRS LPDSQVLNSS LATVEDLIKQ LYAARGYSSD KPTQYALSEM LPPTNMRGIA
EGANIIEAAL RTGERIVILG DFDADGATST ALAVRCLRAM GAQHVDYLVP NRFEFGYGLT
PEIVAVAAKL NPNLIITVDN GIASVEGVNA ANALGIKVLV TDHHLPPEQL PDAAAIVNPN
QKGCEFGSKN LAGVGVIFYL LCALRSQLRA SGWFEQRGIE PPNMASYLDL VALGTVADVV
PLDFNNRILV SQGIARMRQG VCIAGIRALF QVGGRNIERV QSTDLGFVVG PRLNAAGRLD
DMSLGIKMLL TDNYTEALHL AGELDSLNRE RRQIEASMQH EAFKLLDELA LDGEQTPMGV
SLYQADWHQG VIGILASRIK DKLHRPTIAF ADATDTEIKG SGRSVEGVHL RDILDQVATE
NPGLLSKFGG HAMAAGLSLP KESFTAFAEA FDRCVSAHLG GEALTAKVIT DGELPAHLMD
LATAEAIAHA GPWGQNFPEP LFYGEFLLVQ QRIVGEKHLK MVVTPSEYSG LAIDAIAFNV
DVASWPNNSV ERVRLAYVLD VNEFRGNKSL QLRVAHLEAL I
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