| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1206 |
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| Symbol | rplS |
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| ID | 3967875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1550552 |
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| End bp | 1550908 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920280 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_526680 |
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| Protein GI | 90020853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000437176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCTA AGAACAAGAT CATACAAGAG CTGGAAGCTG AGCAGCTCAA GCAGGACGTT
CCTGAGTTCA GCCCTGGTGA TACCGTGGTT GTACAGGTTA AAGTAAAAGA AGGTAACCGC
GAGCGTTTAC AGGCCTTTGA GGGTGTTGTT ATTGCACGTC GTAACCGTGG CTTAGACTCC
GCTTTTACCG TTCGTAAAAT TTCACACGGC ATTGGTGTTG AGCGTACTTT CCAAACTCAC
AGCAAGCAAG TTGACAGCGT TGCTGTTAAG CGTCGCGGTG ATGTTCGTCA AGCTAAGTTG
TACTACTTGC GTGAACTTAC TGGTCGTGCT GCTCGTATTA AAGAAAAATT GGGTTAA
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| Protein sequence | MSSKNKIIQE LEAEQLKQDV PEFSPGDTVV VQVKVKEGNR ERLQAFEGVV IARRNRGLDS
AFTVRKISHG IGVERTFQTH SKQVDSVAVK RRGDVRQAKL YYLRELTGRA ARIKEKLG
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