| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1173 |
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| Symbol | |
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| ID | 3968438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1507978 |
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| End bp | 1509360 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920246 |
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| Product | ribosomal protein L19 |
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| Protein accession | YP_526647 |
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| Protein GI | 90020820 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000211521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGACT CCAAACAAGC AGACCCCAAT ATTGAATACT CCCTGCGCCA GAACGATATT
CGCGCACTGA TTTGCTGCGC AGCAGCAGGC ACCTTGCTGG TTAATGTATC TTGGTCTTCT
TTATTTGTAA TTGAATCTTT AGTTGCCATG TCTGTACTAA GTTATGCACT TGGCAGCTAC
TTATGGCTTA AACAAATCTC GCATGGCCCG CGCGCCGCCA CTTTATTTGA TCGCGTAATG
ACCATGGACG CGGCCGTTAT AGGCTTGGTG GTTAGCTTTT CGGGCTTTAA CATTCTGCCC
ACCATTTTAT TTATCACGAT GATCCAATTT AACAGCCTAA TTAATGGCGG GGTTAAAAAA
TGGGCAATCG ATAATGTGGC ATTTTTTGTG GGCGTGGGGT TTACCTTTTT AATTCGCGAA
CCTCAGCTGG TTTTCTCCGA TAAACTCGAA ATTAGCGCCG TTAGCCTAAT TGGCATATTT
ACTTATTTTT GCGCTTACGC TCTGTATGCG CACAACCGTA TTCACAAACT CGAATTAAGC
AACAAAAAGC TTGTTAACGA ACAAACGCTC TACAAGTTAC GCACCTACAA ACTCGCTCGC
TATTTAACGC CAACGGTTTG GAAAGCCGTA AACGAAGGCA GAGAGAAAGA CCTAAGTACC
GAGCGCAAGC GCGTTACGGT ATTTTTCTCC GACATTATGG GGTTTAGCGC ACTTTCTGAA
GAGCTGGAAG CAGAAACGCT TACCGATATT CTTAACACCT ACCTCACCGA AATGACCAAA
ATCGCCACCA AGCACAAGGG CACCATCGAT AAGTTTATGG GCGATGGGGT AATGATTGTA
TTCGGCGATA ATGAAAGTGC TGGCGTAAAA ACAGACTGCT TGCGCTGTGT CGCTATGTCT
ATTGAAATGC GCCGCAAAAT GAAAGAGCTG CAAACCAAGT GGTACAACCA AGGTATTAAA
AAGCCGTTAC AAATACGTAT GGGCATCAAT ACGGGGTACT GCACCGTTGG GTCGTTTGGC
ACCAACCACT ATATGGACTA CACCGTACTT GGTACCCACG TAAACCTTGC TAGCCGTTTA
GAGTCTGCGG CCTCGCCTGG TGAAATTTTA GTTTCGCACG AAACCTGGGC GCTAATTAAA
GATGTAGTAA TGTGTAGAGA CAAAGGCGAA ATATCGGCCA AAGGTTTCAG CCACGCAATA
AAAGTGTATG AAGTGGCCGA CTTCCGCAAA GATTTAGGCA AACAGCAAAG CTATTTTGAG
CACAACTCTG AAGGCTTTTC TATGCACCTA GACCTAGACA AGATTCGCAA TTACGACAAA
GACAAAGTCA TTACCTATTT AGAGCGCGCA GCAGACAAAT TGCGCGACAA AATCATTTCT
TAA
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| Protein sequence | MSDSKQADPN IEYSLRQNDI RALICCAAAG TLLVNVSWSS LFVIESLVAM SVLSYALGSY
LWLKQISHGP RAATLFDRVM TMDAAVIGLV VSFSGFNILP TILFITMIQF NSLINGGVKK
WAIDNVAFFV GVGFTFLIRE PQLVFSDKLE ISAVSLIGIF TYFCAYALYA HNRIHKLELS
NKKLVNEQTL YKLRTYKLAR YLTPTVWKAV NEGREKDLST ERKRVTVFFS DIMGFSALSE
ELEAETLTDI LNTYLTEMTK IATKHKGTID KFMGDGVMIV FGDNESAGVK TDCLRCVAMS
IEMRRKMKEL QTKWYNQGIK KPLQIRMGIN TGYCTVGSFG TNHYMDYTVL GTHVNLASRL
ESAASPGEIL VSHETWALIK DVVMCRDKGE ISAKGFSHAI KVYEVADFRK DLGKQQSYFE
HNSEGFSMHL DLDKIRNYDK DKVITYLERA ADKLRDKIIS
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