| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1164 |
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| Symbol | |
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| ID | 3968427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1499898 |
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| End bp | 1501169 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920235 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_526638 |
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| Protein GI | 90020811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000136093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACTGC CGAAAGACCC CGAGTCGTCC ACGGTTAAAC CGGTGAAAAA GGACAAGCGC
AAAAACATCA TTAAATCTGA AAAGCTACTA GGCGTATGCT ACGACATTCG CGGCCCAGTG
CTTGAGCACG CCAACCGCCT TGAAGAAGAA GGCCACCGCA TATTGAAGTT AAACATTGGC
AACCCAGCAC CTTTTGGTTT TGAAGCGCCA GATGAAATTA TCACCGATGT GGTTTATAAC
ATTCGCGAGG CGCAGGGCTA TACCGCATCG CGCGGCTTGT TCCCCGCACG CAAAGCCATC
ATGCACGAGT GCCAACGCCA GGAAATACCC AACGTAGAAA TAGAAGATAT CTTCTTGGGC
AACGGCGTAT CAGAACTTAT TGTTATGGCC AACCAGGCCC TGCTTAACAA TGGTGATGAA
GTACTTGTTC CCTCACCAGA CTACCCTCTG TGGACCGCCG CTGTGAACCT CGCTGGGGGC
AAAGCAGTGC ACTACATGTG CGACGAGCAG TCGGACTGGT TCCCCGATAT AGATGATATG
CGCAGTAAAA TAACCAGCCG CACACGTGCA ATAGTGGTTA TAAACCCAAA CAACCCTACC
GGCGCGGTAT ACAGCCAAGA GCTGTTAGAG CAAATTGTAG CGCTTGCACG CGAGCATCAA
CTGGTGATTT TCGCCGACGA AATTTACAGC AAGATTCTGT ACGATGACGC CGAATTTGTG
CCCATGGGGC GCATCGCAAA AGATGTGCTG TGCGTAACCT TTAACGGCTT GTCTAAATCT
TACCGACTGG CGGGTTTCCG CTCGGGTTGG ATAATTCTAA GTGGTGCCAA GCACTTGGCA
AAAGACTATA TTCGCGGCAT AGATATGCTG GCCTCTATGC GCCTGTGTGC CAACGTTCCC
GCTATGCTGG CAGTGCAAAC AGCGCTTGGC GGCTACCAAA GTATTAATGA GCTAATCCTG
CCGGGCGGAC GTTTGCTTGA GCAGCGCGAC GCGGCCATTG AAGAGCTAGC AAAAATACCA
GGAGTAAGCT GTGTGGTGCC CAAAGGGGCA ATATACCTGT TCCCTAAAAT TGATCGCACC
ATGTACGACT TTGATGACGA CCAACAGTTA ATATTAGATT TTCTAATTCA AGAGAAAATT
CTGTTGGTGC AAGGTACTGC CTTCAACTGG AAGCAACCGG ACCACTTTAG AATTGTGTTT
CTACCGCAAG CAGACCAATT GCGTCAGGCG ATTATTAAGT TTGGCGAGTT TTTGCAGCAA
TACCGCATTT AA
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| Protein sequence | MTLPKDPESS TVKPVKKDKR KNIIKSEKLL GVCYDIRGPV LEHANRLEEE GHRILKLNIG
NPAPFGFEAP DEIITDVVYN IREAQGYTAS RGLFPARKAI MHECQRQEIP NVEIEDIFLG
NGVSELIVMA NQALLNNGDE VLVPSPDYPL WTAAVNLAGG KAVHYMCDEQ SDWFPDIDDM
RSKITSRTRA IVVINPNNPT GAVYSQELLE QIVALAREHQ LVIFADEIYS KILYDDAEFV
PMGRIAKDVL CVTFNGLSKS YRLAGFRSGW IILSGAKHLA KDYIRGIDML ASMRLCANVP
AMLAVQTALG GYQSINELIL PGGRLLEQRD AAIEELAKIP GVSCVVPKGA IYLFPKIDRT
MYDFDDDQQL ILDFLIQEKI LLVQGTAFNW KQPDHFRIVF LPQADQLRQA IIKFGEFLQQ
YRI
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