Gene Sde_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1115 
Symbol 
ID3968302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1442829 
End bp1443182 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content47% 
IMG OID637920186 
ProductATPase 
Protein accessionYP_526589 
Protein GI90020762 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.474042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACT TACGCCATTT GTTTAATGGA GAAACGGTAA CCCTGTATGA GTTGGGCGAG 
GCGATTAAAA TAGGTCGCCA TGCGGATTCG GATATTCGTA TCGAAGACCT TACTGTAAGT
GCTACGCATT GTCGTCTAGC TGCCCAAGCC GGTGGCTGGT GGCTTGAAGA TATGCAAAGC
ACCAACGGCA CGCTAATGAA TGGCGAGCGA GTAACACGGG TGCAGTTAGC ACCAAACGAC
GTGTTTAGTG TGGGGACCCA TGCGTTTGAA TTTTTACCGC AGCTACCAAC TGAGTTTGAT
AAAACGCTTA AAATAAAAAA GAGCTGGATA CCCGGTATTT ACTACACCGA ATAG
 
Protein sequence
MAYLRHLFNG ETVTLYELGE AIKIGRHADS DIRIEDLTVS ATHCRLAAQA GGWWLEDMQS 
TNGTLMNGER VTRVQLAPND VFSVGTHAFE FLPQLPTEFD KTLKIKKSWI PGIYYTE