Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1064 |
Symbol | |
ID | 3967858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1363656 |
End bp | 1364864 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920132 |
Product | galactokinase |
Protein accession | YP_526538 |
Protein GI | 90020711 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.32364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGATAA TCGATGCAAA GGTGATTGTT TGCTCGCCTG GTAGAAATTT TGTTACCTTA AAAATTACTA CTGCTGAAGG CGTATATGGC ATTGGCGACG CCACACTTAA TGGCCGCGAA TTGGCTGTTG TGTCCTACTT AGAAGATTAT GTGATTCCTG CCTTAATTGG GCGGGATGCG CAGCGAATAG AAGATATTTG GCAATATTTG TACCGCGGTG CCTATTGGCG CAGGGGGCCG ATAGGGTTAA CGGCTATTGC GGCGGTGGAT GTTGCACTGT GGGATATAAA AGCCAAACAG GCAAATATGC CCCTATACCA GCTGTTAGGT GGTCGCAGTC GAGATCGCAT AATGGTTTAT ACGCACGCCA ATGGCAAAGA TATAGACACC ACGCTTGAGG CCGTGGCCAG CGCGCAAGCA AAGGGGTACA GGGCAATTCG CGTGCAAAGC GGTATTCCTG GTATTGCTAA AACCTACGGC GTGGCGAAGC AGGGGGATGC CTACGAGCCT GCCGACGCGG ATCTACCTTC CGAAGAAAGC TGGAGCAGTG AGAAATACTT AAATTTTGTG CCAGAGCTAT TTAAGCGTGT GCGGCAGGAG TTTGGCGATG AGTTGCACCT ACTGCATGAC GTGCACCACA GGTTATCGCC TATTGAGGCT GCGCGGCTTG GTAAAGCGCT GGAGCCATGC CATTTGTTTT GGTTAGAAGA TGCCACACCA GCAGAAAACC AAGACGCCTT TAAACTTATT CGCCAGCATA CAACCACCCC GCTTGCCGTA GGCGAGGTGT TTAACACTAT TCACGATTGC CGAGAATTAA TGCAGCAGCA ATTGATCGAT TATATTCGCA CGTCCGTTGT TCATGCCGGT GGTATTACCG CCATGCGTCG AATTGCAGAT TTGGGCAGTT TGTTTAACGT TAAAATGGGT AGTCACGGTG CAACAGATTT ATCGCCAGTT TGCATGGGGG CTGCACTGCA TTTTGATTAT TGGGTGCCTA ATTTTGGTAT TCAGGAGCAT ATGGCCCACA GCCCGCTCAT GGAGTCTGTA TTTACCCGCA GTTACCACTT TGAGGATGGC TTTTTTACCC CAGGGGAGAA AGCGGGCCAC GGGGTAGATA TAAACGAAGC TGAAGCTGCT AAATACCCTT ACAAGCGCGC CATGCTTCCT GTTGCTCGAC TGGAAGATGG CACGCTTTGG CATTGGTAG
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Protein sequence | MKIIDAKVIV CSPGRNFVTL KITTAEGVYG IGDATLNGRE LAVVSYLEDY VIPALIGRDA QRIEDIWQYL YRGAYWRRGP IGLTAIAAVD VALWDIKAKQ ANMPLYQLLG GRSRDRIMVY THANGKDIDT TLEAVASAQA KGYRAIRVQS GIPGIAKTYG VAKQGDAYEP ADADLPSEES WSSEKYLNFV PELFKRVRQE FGDELHLLHD VHHRLSPIEA ARLGKALEPC HLFWLEDATP AENQDAFKLI RQHTTTPLAV GEVFNTIHDC RELMQQQLID YIRTSVVHAG GITAMRRIAD LGSLFNVKMG SHGATDLSPV CMGAALHFDY WVPNFGIQEH MAHSPLMESV FTRSYHFEDG FFTPGEKAGH GVDINEAEAA KYPYKRAMLP VARLEDGTLW HW
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