| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1004 |
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| Symbol | |
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| ID | 3965129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1285814 |
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| End bp | 1286686 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920071 |
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| Product | hypothetical protein |
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| Protein accession | YP_526478 |
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| Protein GI | 90020651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.863702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC TTCCACTTAA AAATGGCATC AGCTTAAAGG CGCAACACTA CCAAGGTATT
CTAACCACAC TGCCCGATGT CGGCTGGCTG GAAATCCACC CAGAAAACTA CATGAGCAGT
GGCGGCCTCG ATCATAAATA TCTGCGCGAA ATTAGCCAGC ACTACCCCAT ATCGATGCAT
GGCGTAGGCA TGTCATTAGG TAGCGTAAAC GGCGTTAGCA ACTCTCACCT GCAAAATTTA
AAAAAACTGG TAGACACCTA CCAGCCAATT CAAGTTTCTG AGCATATCGC TTGGAGCGAG
CACCAGTCGA CACACCTTAA CGACCTGCTT CCACTGCCTT ACACTAACGA AGCACTGTCG
GTAATCTGCG AGAATATTGA TAAAGTGCAA GCCACACTAA ACCGCACAAT ACTCGTAGAA
AACCCTTCAA CCTACATAGA CTTTGAACAC CAAGACTTTT CAGAGCCAGA ATTTTTAAGC
GCAATAGTGA AGCAAACCAG CTGCGGCTTA CTGCTAGATA TAAACAATAT TTTTGTATCT
GCTAGCAACA ACACTTTCGA CCCGTATGAA TATTTAAATA ATCTGCCTGC CGACCCTGTG
GGAGAAGTTC ACCTAGCCGG CCACAGCGTT GTACCGCTAA CGGAATTTAA AGAAATACGC
ATAGATGATC ACAGCAGCGA AGTAAGCCCA CAGGTATGGG CTTTATACCA ACACTTTATT
CGCATCAATA ACCGCGCGTT TCCGACGCTT GTAGAGTGGG ACACCAACAT TCCGAGCTTA
GAGATATTAG TAAAAGAAAG TAAAAAGGCC AACAAAGCCA TGCAGTACGC GCTACAACAA
AGTAGCAGCG AGGCAACCTA TGACGCTAAA TAA
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| Protein sequence | MPNLPLKNGI SLKAQHYQGI LTTLPDVGWL EIHPENYMSS GGLDHKYLRE ISQHYPISMH
GVGMSLGSVN GVSNSHLQNL KKLVDTYQPI QVSEHIAWSE HQSTHLNDLL PLPYTNEALS
VICENIDKVQ ATLNRTILVE NPSTYIDFEH QDFSEPEFLS AIVKQTSCGL LLDINNIFVS
ASNNTFDPYE YLNNLPADPV GEVHLAGHSV VPLTEFKEIR IDDHSSEVSP QVWALYQHFI
RINNRAFPTL VEWDTNIPSL EILVKESKKA NKAMQYALQQ SSSEATYDAK
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