| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0979 |
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| Symbol | |
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| ID | 3966221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1253932 |
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| End bp | 1255275 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920046 |
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| Product | protein translocase subunit secY/sec61 alpha |
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| Protein accession | YP_526453 |
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| Protein GI | 90020626 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000479753 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00549319 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACGC CAGGTAACAT GCAGGTTGGT AATCAAAAAG GTTTGGGCGA GCTTTGGGCT
CGCCTAAAAT TTTTGCTGTT AGCGATTTTT ATTTATCGCT TAGGTACTCA TATACCAGTT
CCTGGTATTG ATCCCGAACA AATCGCTCAA ATGTTTAACC GCAACCAAGG TACATTCTTG
GGTATGTTAA ACATGTTCTC TGGCGGTGCT TGGGAGCGTA TGAGTATTTT GGCTCTTGGT
ATTATGCCGT ACATTTCTGC TTCTATTATT ATGCAGATGA TGGCAGCAGT TACCCCGTCT
TTAGAAGCAT TAAAGAAAGA GGGTGAGTCA GGCAGAAGAA AGATCAGTCA GTACACTCGC
TACTTGACCG TTGCGTTGGC TTTAATTCAA GCATTTGTAA TGGTTGCAGG TTTAGCTGGT
CAAGGCATGG CTTATGCCGG CTTGGCGCCA CTTAGCTTTT ATGTCATTGC GGTTACTTCA
TTGGTAACTG GTGCTGTATT CATGATGTGG TTGGGTGAGC AAGTAACTGA AAGAGGTATC
GGCAACGGTA TTTCTATGCT GATTTTCGCA GGTATTGTTG CTGGTTTGCC GGGCGCCGTA
GGTCAGGCGT TCGAAAGTGC GCGTCAAGGC GACTTACACC CTATAGCGTT ATTAGCGATA
GGTTTGGCTG CTGTAGCAAT TGTTTGGTTT GTTGTGAGAA TGGAGCGCGG CCAGCGTCGC
ATAACTATTC AGTACGCTCG TCGCCAGTCT GGTCGTCAAG CTTACTCTGC ACAAACAAGT
CATTTGCCGC TAAAAATCAA CATGGCTGGT GTTATACCGG TTATTTTTGC GAGCAGTATT
TTATTGTTCC CTGCTTCAAT CGCGCAGTGG TTCGGTAATG CATCAGAGGG TAAAACCGCT
GTAATCTTAC AGGAGATTGC GTTGGCTTTA GGGCCCGGCC AATGGTTGAA CTTTGTGGTG
TTCGGTGCGT TAATCATCTT GTTCTGTTTT GTTTACACGG CAATGATGTA TAACCCGAAA
GAAGTTGCAG ATAATTTAAA GCGTGGTGGT GCGTATATTC CAGGTATTCG ACCTGGTGAC
CAGTCCGCTA AATATATTGA TGGAGTATTG ACTCGCTTAA CAGTGGTTGG TTCTCTTTAT
ATTGCTGCAG TCGCTTTATT GCCTCAGTTT TTGATGGTTG CGGCTGATGT ACCTTTCTAC
TTAGGTGGTA CTTCATTACT TATCGTTGTG GTAGTGGTGA TGGACTTTAT GTCCCAAGTG
CAATCGCATT TGATGTCACA TCAATACGAT TCAGTCATGA AAAAAGCAAA TTTGCAGAGT
TACGGTAAAG GCGCAACTCG TTAA
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| Protein sequence | MATPGNMQVG NQKGLGELWA RLKFLLLAIF IYRLGTHIPV PGIDPEQIAQ MFNRNQGTFL
GMLNMFSGGA WERMSILALG IMPYISASII MQMMAAVTPS LEALKKEGES GRRKISQYTR
YLTVALALIQ AFVMVAGLAG QGMAYAGLAP LSFYVIAVTS LVTGAVFMMW LGEQVTERGI
GNGISMLIFA GIVAGLPGAV GQAFESARQG DLHPIALLAI GLAAVAIVWF VVRMERGQRR
ITIQYARRQS GRQAYSAQTS HLPLKINMAG VIPVIFASSI LLFPASIAQW FGNASEGKTA
VILQEIALAL GPGQWLNFVV FGALIILFCF VYTAMMYNPK EVADNLKRGG AYIPGIRPGD
QSAKYIDGVL TRLTVVGSLY IAAVALLPQF LMVAADVPFY LGGTSLLIVV VVVMDFMSQV
QSHLMSHQYD SVMKKANLQS YGKGATR
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