| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0974 |
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| Symbol | rplF |
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| ID | 3966216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1251763 |
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| End bp | 1252296 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920041 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_526448 |
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| Protein GI | 90020621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000234587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000109608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACGTG TTGCAAATAA TCCAGTACAG TTGCCTTCTG GAGTACAGGT CGACCTTAAA
GGTAGTGACC TGTCTGTTAA AGGCAGTAAA GGCGCTATGT CTTTATCAGT TCACAGTAGC
GTTGCCGTCG TACAAGAAGA CAACGTACTT ACTTTTGCTG CTAAAGATGG GGCCAAGAGC
TCTAAGGCAA TGGCTGGTAC TGTACGCTCA TTGGTAAATA ACATGGTTAC CGGTGTAAGC
GTTGGTTTTG AGAAAAAATT ACAGTTGGTC GGTGTTGGTT ACCGGACAAA AGTAACGGGC
AATGTTTTAA ACCTAACTTT AGGTTTCTCT CACCCAGTAG ATTATGTATT GCCTGAAGGT
GTAACAGCTG AAACACCAAC TCAGACTGAA ATCGTTCTGA AATGTTCTGA TAAACAGTTG
TTGGGTCAAG TTGCTGCAGA AATCAGAGCT TTCCGTCCAC CAGAGCCATA CAAAGGCAAG
GGTGTTCGCT ATGCTGACGA GAACGTTCGT CGTAAAGAAG CGAAGAAAAA GTAA
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| Protein sequence | MSRVANNPVQ LPSGVQVDLK GSDLSVKGSK GAMSLSVHSS VAVVQEDNVL TFAAKDGAKS
SKAMAGTVRS LVNNMVTGVS VGFEKKLQLV GVGYRTKVTG NVLNLTLGFS HPVDYVLPEG
VTAETPTQTE IVLKCSDKQL LGQVAAEIRA FRPPEPYKGK GVRYADENVR RKEAKKK
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