| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0967 |
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| Symbol | rplP |
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| ID | 3967682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1248769 |
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| End bp | 1249182 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920034 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_526441 |
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| Protein GI | 90020614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00104122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000106632 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CGAAGCGTAC AAAATTTCGC AAGCAACAAA AAGGGCGAAA CCGTGGACTG
GCGCATCGTG GCTCAAAGGT TAGCTTTGGT GAGTTCGCGC TCAAGGCTAC CGGGCGTGGA
CGAATTACTG CTCGTCAAAT CGAAGCAGCC CGTCGTGCGA TGACTCGTCA TGTTAAACGT
GGTGGAAAAA TTTGGATTCG AGTTTTTCCA GACAAACCTA TTACTGAGAA GCCTCTTGAG
GTTCGTCAAG GTAAGGGTAA AGGTAATGTT GAGTACTGGG TGTGTCAAAT CCAGCCAGGA
AAAGTACTTT ACGAAATGGA AGGTGTTTCT GAAGAATTAG CTCGTGAAGC TTTCACGCTA
GCTGCTGCGA AACTACCTGT GACTACAACT TTTGTTAAAC GATCGGTGAT GTAA
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| Protein sequence | MLQPKRTKFR KQQKGRNRGL AHRGSKVSFG EFALKATGRG RITARQIEAA RRAMTRHVKR
GGKIWIRVFP DKPITEKPLE VRQGKGKGNV EYWVCQIQPG KVLYEMEGVS EELAREAFTL
AAAKLPVTTT FVKRSVM
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