Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0962 |
Symbol | rplW |
ID | 3967677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1246238 |
End bp | 1246534 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637920029 |
Product | 50S ribosomal protein L23 |
Protein accession | YP_526436 |
Protein GI | 90020609 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000402083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000137402 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACTTAG AGCGCCTATA TAAAGTTCTT CTTGGTCCTG TTATTTCTGA AAAGTCAGCT GTAGTTGCTG ATAAAGGTAA TCAGGTTGTT TTTAAAGTAG TTAAAACAGC CACTAAGCCA GAAATTAAAG CAGCCGTAGA AAAACTGTTT AATGTAAATG TTCGAGACGT TCGCGTATTA AATGTTAAAG GCAAAACTAA GCGTACTCGC TTTGGTTTGG GCCAGCGCAG CGACTGGAAA AAAGCCTACG TACGACTAGA GCAAGGTCAA GAAATTGATT TTGCCATAGC GGAATAA
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Protein sequence | MNLERLYKVL LGPVISEKSA VVADKGNQVV FKVVKTATKP EIKAAVEKLF NVNVRDVRVL NVKGKTKRTR FGLGQRSDWK KAYVRLEQGQ EIDFAIAE
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