| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0931 |
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| Symbol | |
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| ID | 3965572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1203474 |
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| End bp | 1204697 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919998 |
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| Product | elongation factor Tu |
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| Protein accession | YP_526405 |
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| Protein GI | 90020578 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000100695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00709672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAAAAG AAAAATTTGA ACGTAATAAG CCTCACGTAA ACGTGGGCAC AATTGGTCAC
GTTGACCACG GTAAAACTAC TTTGACTGCA GCGTTAACGC GCGTGTGTTC AGAAGTTTGG
GGTGGTGCTG CGGTAGCGTT TGACGGTATC GATAATGCTC CAGAAGAGCG TGAGCGTGGT
ATTACTATCG CTACCTCTCA CGTAGAGTAC GATTCACCGA TTCGTCACTA CGCCCACGTT
GACTGCCCAG GTCACGCCGA CTACGTGAAA AACATGATTA CTGGTGCCGC TCAGATGGAT
GGCGCTATCT TGGTATGTGG TTCTACTGAC GGTCCAATGC CTCAGACTCG TGAGCACATC
CTTTTGTCTC GTCAGGTTGG TGTACCTTAC ATCGTAGTAT TCTTGAACAA GGCAGACTTG
CTAGCAGAAG ACTGTGGCGG TGTTGACTCT GAAGAATACG CAGAGATGAT GGAATTGGTT
GAAATGGAAT TGCGTGAGTT GTTAGACACT TACGAATTCC CAGGCGACGA CACTCCAATC
ATTGCTGGTT CTGCTTTGAT GGCATTGAAC GGCGAAGACG AGAACGAGCT AGGTACTACC
GCTGTTAAGA AATTGGTAGA AGCTTTGGAT TCATACATTC CAGAGCCAGA GCGTGCAATT
GATCAGCCGT TCTTGATGCC AGTAGAAGAC GTATTCTCAA TCTCTGGTCG CGGTACTGTT
GTGACTGGTC GTGTTGAGCG CGGTATTGTT AAAGTTGGTG AAGAATTGGA AATCGTTGGT
ATTCGCGATA CCACCAAAAC TACCTGTACT GGTGTTGAAA TGTTCCGTAA GTTGCTTGAC
GAAGGTCGTG CAGGTGAGAA CGTTGGTGTG TTGTTGCGTG GTACTAAGCG TGATGATGTT
GAGCGTGGTC AAGTATTGTC TAAGCCAGGT TCAGTTACTC CGCACACTAC TTTCCAATCA
GAAATCTACG TATTGTCTAA AGATGAAGGT GGTCGTCACA CTCCATTCTT CAAAGGCTAT
CGTCCACAGT TCTACTTCCG TACAACTGAC GTAACTGGTG CTTGTGAGCT TCCAGAAGGC
GTAGAAATGG TAATGCCAGG TGATAACGTA CAAATGACTG TTACTTTGAT CGCTCCAATC
GCGATGGAAG AAGGTTTGCG CTTCGCTATC CGCGAAGGTG GCCGTACAGT TGGTGCTGGT
GTTGTTGCTA AAATCATCGC TTAA
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| Protein sequence | MAKEKFERNK PHVNVGTIGH VDHGKTTLTA ALTRVCSEVW GGAAVAFDGI DNAPEERERG
ITIATSHVEY DSPIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCGSTD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL LAEDCGGVDS EEYAEMMELV EMELRELLDT YEFPGDDTPI
IAGSALMALN GEDENELGTT AVKKLVEALD SYIPEPERAI DQPFLMPVED VFSISGRGTV
VTGRVERGIV KVGEELEIVG IRDTTKTTCT GVEMFRKLLD EGRAGENVGV LLRGTKRDDV
ERGQVLSKPG SVTPHTTFQS EIYVLSKDEG GRHTPFFKGY RPQFYFRTTD VTGACELPEG
VEMVMPGDNV QMTVTLIAPI AMEEGLRFAI REGGRTVGAG VVAKIIA
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