| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0914 |
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| Symbol | |
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| ID | 3965550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1179342 |
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| End bp | 1180571 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637919976 |
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| Product | alanine racemase |
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| Protein accession | YP_526388 |
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| Protein GI | 90020561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.452475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000188246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGGTGT GCCTTTTATT GTTTGCGCTA AAGCGTCGGT GGCGTTGGTT TGGCTTTAGG
CTGTATGCTA ACGCCCTTGT TTTATTTTTA ATAACTCCAG TAGATATTGC AGCCCCTATG
ACCGCGTTTT CCGGTAAGTT AACAATTAAC CTCGATGCTA TCGCCGCGAA CTGGCGACTT
ATTCAAAGCC GCCTTGCCGC TGGTGCACGC GCGGGGGCGG TAGTAAAGGC CGATGCATAC
GGCTTGGGGG TGCAAGAGGT TGCCCCTGCT CTTTATCGCG CGGGTTGCCG AGATTTTTTT
GTGGCTAACC TTGCGGAGGC ATTACTGGTT CGCTCGCTGC TGGCGGGTGA TGCTCAGGTT
ATAGTTTTGT CTGGCTGTGC GCCGCGCGAA GAGAGTGAGT TTGTGCGCAA TGGCATAGTG
CCTGTAATTA CCTCCGCGAC TATGGCCGAG CGATGGCTAG GGGTGAAAGG TGCATCCAAG
TGTGGCGCAG TGCTAAAAGT TAACTCTGGT ATGGGGCGCT TGGGGTTAGA GCCAAACGAG
TTTGAATCCC TGCTGATGCA CCCTAATTTC GCCAATGCTG GGTTCTTTAT GCTTATGAGC
CATCTCGCGT GCGCAGATCA ATTTGATCAC CCATTAAATG CAGCGCAATT ACAGCGGTTT
GAGCGCATGA GGCAGGCCTT TTTGAAAAAA GTGCCTGCCG CCACGGCCAG CCTTGCGAAC
TCATCTGGCA TATTTATTTC TCCTTCCTTT CATTACGATG TGGCGCGGCC AGGGGTTGCG
CTCTACGGCG GCAACCCGCT GCAGAGGCGG CAAAACCCTA TGCGAAAAGT GGTAGATTTG
CGGCTGCCGG TATTACAGGT GCGTCATCTC GCATCAGGTG AGGCTGTTGG TTATGGCGCG
AGTTTTATCA CGCAGCGCCC CAGCGTGTTA CTTACGCTTG CTGGCGGCTA TGCCGATGGT
CTGTTTCGTT CTGCGGCGGC GGGTGGCGTG GTTTACTTGG GAGAAAAGCC TTTGCCCATT
GTGGGCCGTG TATCGATGGA TTCAATTGTG GTGGATGCAA CGGATGTACC TCAAGCCGCG
ATGCCTGCAG AAGGGAATAT GTTGGAGCTT CTAGGCGATA ACGTCGGCGT GGATGACCTT
GCGGCGGCTG CAGGCACTAT CGGTTACGAA ATACTTACCT CGTTGGGTGG CCGCTACAGG
CGCGAATATA TCGGAGGCGC CAATGACTGA
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| Protein sequence | MTVCLLLFAL KRRWRWFGFR LYANALVLFL ITPVDIAAPM TAFSGKLTIN LDAIAANWRL
IQSRLAAGAR AGAVVKADAY GLGVQEVAPA LYRAGCRDFF VANLAEALLV RSLLAGDAQV
IVLSGCAPRE ESEFVRNGIV PVITSATMAE RWLGVKGASK CGAVLKVNSG MGRLGLEPNE
FESLLMHPNF ANAGFFMLMS HLACADQFDH PLNAAQLQRF ERMRQAFLKK VPAATASLAN
SSGIFISPSF HYDVARPGVA LYGGNPLQRR QNPMRKVVDL RLPVLQVRHL ASGEAVGYGA
SFITQRPSVL LTLAGGYADG LFRSAAAGGV VYLGEKPLPI VGRVSMDSIV VDATDVPQAA
MPAEGNMLEL LGDNVGVDDL AAAAGTIGYE ILTSLGGRYR REYIGGAND
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