| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0910 |
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| Symbol | |
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| ID | 3965546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1175627 |
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| End bp | 1176094 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919972 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_526384 |
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| Protein GI | 90020557 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000231178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000980143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTTCGAAT TGCATCCACA ACTTAAGCAA GACACCGTGA TTGTAGGCCA GTTTAACCTG
TCCTTAGTGC TGTTACATAA AGATGCGAAC TACCCTTGGT GTATATTGGT GCCGAAACGC
TCAAATATGA ACGAAATACA TCATTTGTCC GAGGTAGACC AAATTCAGCT TATTAAAGAG
TCGTCCCACC TAAGCGAGGT GATGACCAGC ATTTTTGCCC CCGATACTAT GAATATTGCT
GAGCTAGGTA ACTTGGTGCC GCAATTACAC TTGCATCATG TGGCAAGGTA CAAAACCGAT
GCCTGCTGGC CTGCTGCTGT TTGGGGGGCG AAACCGCCGG CGGTTTATAC CGAGGGCGTA
ATGGAAGAGC GTTTGCAGCG GTTGCAGTCT TCACTAGTTG GTGAAGGTTT TGAGGCTGCG
GGTGCAATGA GCCCAGATAG TAATGTAAAC CCCGGTTATA CGCCTTAG
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| Protein sequence | MFELHPQLKQ DTVIVGQFNL SLVLLHKDAN YPWCILVPKR SNMNEIHHLS EVDQIQLIKE
SSHLSEVMTS IFAPDTMNIA ELGNLVPQLH LHHVARYKTD ACWPAAVWGA KPPAVYTEGV
MEERLQRLQS SLVGEGFEAA GAMSPDSNVN PGYTP
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