| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0907 |
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| Symbol | |
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| ID | 3965543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1171148 |
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| End bp | 1172764 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919969 |
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| Product | Na+/melibiose symporter and related transporters-like |
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| Protein accession | YP_526381 |
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| Protein GI | 90020554 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000225717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000181101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGCAAG ATAGAACGGG GACAATTAGC TTAAAAGAGA AAATTGGCTA CGGCTTTGGC
GATGCCGCAT CTAATTTTTA TTGGGCTATT ATCGGCTCTT ACTTGGTGTT CTTTTACACC
GATATTTTTG GTATTTCGGC CAAATCCGTC GCCATCATGA TGGTCGTTAC CAAGCTTATA
GATGCCTGTA CAGACCCAGC CATAGGGGCA ATAGCAGATA GAACGAACAC CCGCTGGGGC
AAGTTCCGGC CTTACTTATT GTTTGGCGCC CTACCCATGG CCGGTGCTGC AGTGCTCACC
ATGAGCACAC CAGATTTAGG CGATACAGGT AAATTAGTAT GGGCCTATAT TACCTACACC
CTAATGATGC TTACCTACAC CATTTTGAAC TTGCCATACT CATCGTTAGC AGGGGTGATA
ACCGCAAACA CAGCAGAGCG AAACTCATTA TTTAGCATTC GCTTCTTTTG CGCCTATTTC
ACCAGTATTA TCGTTGGTGC CGCCACCCCA GATCTCGCCG CGTATTTTGG CCAAGGCGAC
GACGCCAAAG GCTGGCAAAT GACCATGATG CTTTACGCCT GCGTTGCAAC AATTCTGTTT
TGGATAACCT TTGCCTCAAC CAAAGAGCGC GTGAGCCCAC CTGTTGGACA AAAAACCAAC
CCCATCGACG ATATAAAAGA CCTGCTTAAA AACCGCGCAT GGGTAGTACT ATTCGCACTC
GCGCTAATCA TAATGGTTAC CATTGTATTG CGCGGCAGCT CTGCACCTTA TTACTTCAAA
TACTTTGTAG AGCGCCCAGA CCTTATGGGC AGCTTTATTG GTTTACAAAT GGCAGCCTAC
GCTGTGGGCG CCTTGTCCTA CCCATTTCTA TTGCGTCGCA TAGGCGACAA AGCAAAACTG
CTAACCATTT TGATGGCCAC GGTTGGTGTG CTTTGTATTG TTTTTGCCTT TATTCCAAAG
CCCACCTCTA ACGGCGTAGT TACAATCACC CAAGACGAGG CAATTACCTT AGACGCTGCA
GAATTACTGG GCGAAGCACA TAAAGATGGC GACAGCTACC AGTGGACATA CAACGAAAAA
GTATTTTGGA TTATTAAAAA CCGCGTTGCC TACCCAGAAA CAGGCCCAAC ACTTAGCTTA
GAAACCGCTA AGAGCGAAGC CATAAGCGTT ATAAAAACAA GTAAGGATGC GAATGGCGCT
GTAACCGTTA TAGATAGCGC CAGCATGCCA ATCGAAATTT ATATTATGTT TATTTTGAAC
ATTTTAATTA GCTTGGCGCT CGGCCCTAAA TCGCCGCTTA CTTGGTCTAT GCTGGCCGAT
GCCGCAGATT ACAACGAGTG GAAAACTGGA CGCCGCGCCA CGGGCATGAC TTTCTCTGCC
GCAAGCTTTT CGCAAAAAAT GGGCGGCATG GTAGGCAGCG TAGCAATCGG CGCAGTGCTC
GCCTCGATTG GTTACACCGC CAACGAAGCG CAATCCGACG GCTCGCAAAC CGGTATTGTT
ATTTTACAAA CCGCCGCCCC TGGTGTGTTT GCTTTTGTGG CCATTTTCGC ACTGCGTTTT
TACAACTTAA CTGGCAACAA AATTGAGCAA ATACAAAAAG AGCTCGCCGA AAGATAA
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| Protein sequence | MAQDRTGTIS LKEKIGYGFG DAASNFYWAI IGSYLVFFYT DIFGISAKSV AIMMVVTKLI
DACTDPAIGA IADRTNTRWG KFRPYLLFGA LPMAGAAVLT MSTPDLGDTG KLVWAYITYT
LMMLTYTILN LPYSSLAGVI TANTAERNSL FSIRFFCAYF TSIIVGAATP DLAAYFGQGD
DAKGWQMTMM LYACVATILF WITFASTKER VSPPVGQKTN PIDDIKDLLK NRAWVVLFAL
ALIIMVTIVL RGSSAPYYFK YFVERPDLMG SFIGLQMAAY AVGALSYPFL LRRIGDKAKL
LTILMATVGV LCIVFAFIPK PTSNGVVTIT QDEAITLDAA ELLGEAHKDG DSYQWTYNEK
VFWIIKNRVA YPETGPTLSL ETAKSEAISV IKTSKDANGA VTVIDSASMP IEIYIMFILN
ILISLALGPK SPLTWSMLAD AADYNEWKTG RRATGMTFSA ASFSQKMGGM VGSVAIGAVL
ASIGYTANEA QSDGSQTGIV ILQTAAPGVF AFVAIFALRF YNLTGNKIEQ IQKELAER
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