| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0905 |
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| Symbol | |
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| ID | 3965541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1167555 |
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| End bp | 1168562 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919967 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_526379 |
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| Protein GI | 90020552 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000824566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCTTGG CGGATGTGGC CGAAACTGCT GGTGTTAGCG CAATCACAGT TTCGCGTGTA
ATTAATCAGC CAGATAAGGT TTCCGCTAGC ATGCGTGATA AGGTCCAAAA GGCCATCGAT
AAGTTGGGCT ATATTCCCAA CCGTTCCGCA AGCGCGTTAG CCTCCGCTCG CTCTGGGGTG
TTGGGGGTGG TTATTCCCTC GTTGTCCAAT GCTGTTTTTA ACGATGTGTT GCGCGGTATC
TACGATGTAG CGGGCCCCGC TGGCTATCAA GTGCTGTTGG TAGATACCCA TTATTCGCCA
ATGGAAGAAG AGCGCATGGT GCGCACCCTG TTAAGTCAGG CGCCAGAGGC CATGATTATT
ACCGGTGGGG ATCAGACTCA GCACACCCGC AAAATGCTTG TTAAATCTGG CGTGCCCATT
GTGCAGGTTA TGGAAACCGT AGAGAGCCCT ATCGATATGA ACGTAGGTTT TTCTCATCGC
CAAGCAGGTT ACGATTTAGT GACGCGCTTA TTGGCTAACG GCTTTGACCG CATTGGCTTT
TTGGGCGCTA GAATGGACCC GCGTGCGCAA CAGCGTATGT TGGGGTACAA GCAGGCTATG
GATACCGCTG GTAGAAATTA CGATGGCCTT ATTGTAACCA CGCCTAAGCC TTCTTCTATT
GCGATGGGGG GCGAGTTACT GCGCAGTGTT ATGTCTAGCA GCAACGGTGT GTGTGATGCG
CTATTTGCCT GTAACGACGA CTTGGCGTTG GGGGCTTTGT TTGAGTGCCA GCGTATGAAT
ATAAGCGTAC CGGGTGATAT GGCTATTTGC GGCTTTAACG ATATTGAAAC CGCGGCATTA
GTCAATCCAT CTTTATCGAG CGTGCATGTG CCGCGCTACG AAATGGGCGT AACCGCAACC
GAAATGGTGC TAAAGGTGTT GGCGGGTAAC GAAGTTGAAA ACAAAAAAAT CGACATTGGC
TACACCATTC AAATGCGCCA ATCCACCAGC ACCGATATTC ATTGGTAG
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| Protein sequence | MTLADVAETA GVSAITVSRV INQPDKVSAS MRDKVQKAID KLGYIPNRSA SALASARSGV
LGVVIPSLSN AVFNDVLRGI YDVAGPAGYQ VLLVDTHYSP MEEERMVRTL LSQAPEAMII
TGGDQTQHTR KMLVKSGVPI VQVMETVESP IDMNVGFSHR QAGYDLVTRL LANGFDRIGF
LGARMDPRAQ QRMLGYKQAM DTAGRNYDGL IVTTPKPSSI AMGGELLRSV MSSSNGVCDA
LFACNDDLAL GALFECQRMN ISVPGDMAIC GFNDIETAAL VNPSLSSVHV PRYEMGVTAT
EMVLKVLAGN EVENKKIDIG YTIQMRQSTS TDIHW
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