Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0904 |
Symbol | |
ID | 3965501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1166827 |
End bp | 1167381 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919966 |
Product | gluconate kinase |
Protein accession | YP_526378 |
Protein GI | 90020551 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3265] Gluconate kinase |
TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.119231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000668063 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCTCTC CAGAACCCAA ACTAAAGCCA GAAGTGAAGC GGCCGAATCT CGTTGTAGTA ATGGGGGTAT CCGGTTGTGG TAAATCGACC ATTGCCCAAA AAATTGCAGA TACACTGAGC TACCGCTATT TGGAAGCCGA CGATTACCAC AGCGAAGAAG CTAAATCGCG CATGGCATCA GGCATACCGC TAACCAATGA AATGCGCAAA CCGTGGGTAA GATCCATTTG CGGGCACTTG CGCCAACTTG CGCGGCTGCA TATAGATTGC ACCTTGGCGT TTTCGGGCTT GAGAAAGGAA CACAGAGATC AAATACGTGA AGCGGGCTAC AACACTATTT TTGTGTTTTT AAACGGCGAC AAAAATACAA TTAAACGCAG GATGGACACG CGCGCCAACC ACTTTATGCC CACCAAGCTA TTGGATAGCC AGTTCGACAC GCTTGAGCGC CCAGTGAATG AGGACGACGT AATAGCTGTT CCTATTGATG TACCCGTAGG TGATGTAGTG ACAAGCTCAT TGAAAAGTAT CTCTAAAAAA CTACTAACCA CTTAA
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Protein sequence | MLSPEPKLKP EVKRPNLVVV MGVSGCGKST IAQKIADTLS YRYLEADDYH SEEAKSRMAS GIPLTNEMRK PWVRSICGHL RQLARLHIDC TLAFSGLRKE HRDQIREAGY NTIFVFLNGD KNTIKRRMDT RANHFMPTKL LDSQFDTLER PVNEDDVIAV PIDVPVGDVV TSSLKSISKK LLTT
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