| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0902 |
|---|
| Symbol | |
|---|
| ID | 3965499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1165055 |
|---|
| End bp | 1165420 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637919964 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_526376 |
|---|
| Protein GI | 90020549 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.308515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000063687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAC CTCTATTAAT ATGTGATGAC TCCAATATGG CGCGCAAGCA GGTTGCGCGT
GCGCTACCCG ACGGTTGGGA TGTGGATATT ACCTTTGCCA CTAACGGTAG CGAAGCCCTT
GACGTTATAC GTGCAGGCAA GGGGGAAATG GTATTTTTAG ATCTCACTAT GCCGGTGCTG
GATGGCTTTG GCGTGTTAGA AGCTGTAAAA AACGAAGGTC TTAAGGCTGT AATTATTGTT
ATTTCTGGCG ATATTCAGCC TGCTGCCCAC GAGCGTGTAA TGGCGCTAGG GGCCTTGGAG
TTTATAAAAA AACCCGTTAG TAAAGAAAAG CTCGGCGAAG TGCTGGAGCG TTTTGGTCTG
TTGTAG
|
|---|
| Protein sequence | MATPLLICDD SNMARKQVAR ALPDGWDVDI TFATNGSEAL DVIRAGKGEM VFLDLTMPVL
DGFGVLEAVK NEGLKAVIIV ISGDIQPAAH ERVMALGALE FIKKPVSKEK LGEVLERFGL
L
|
|---|
| |