| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0897 |
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| Symbol | |
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| ID | 3965494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1160074 |
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| End bp | 1161906 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919959 |
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| Product | translation elongation factor G |
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| Protein accession | YP_526371 |
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| Protein GI | 90020544 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000153698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTTTA TTAGAGGCCT TTGGCGCGGC ATTAGTGCGC TGCGGAATTT CATTTTTAAT
ATTCTATTTC TAATAATTTT TATTAGCATA TTGGTAGCCA TGTTTAGCTC ACCATTCGCA
AAAATAGAAA ACGGCACTGC GCTGTGGCTG GCACCATCGG GGGATTTAGT CGATCAACTT
ACCTACGACC CTTCACCTTT AGCATTATTA GATAGCTCTA ACCGCCCTAA CGAAACATTA
GTAAGCGACC TCATTACCGC TATTGATCGC GCCAAAACAG ACTCGCGCAT TAGCGCATTA
GTACTTAACT TAAACCATTT AACCGGCGGT GGTGTAAGCA AGCTTACAGA AGTGGGCGAT
GCCATTTTGC GTTTTAAAGA AGGCGGTAAA GAGGTAGTTG CATTTGGCGA TAACCTAAGC
CAACAACAAT ACTATTTGGC TACCTACGCT GACCATATTT ATTTAAATGA CTTAGGCGCA
GTATTCGTAA CGGGCTACGG TATATACCGA AATTATTGGG CCGAAGCCGC CGACAAACTT
AAATTAAAAT TTCATGTATT TCGCGTAGGT GATTATAAAG ATGCCATAGA GCCGTTTGTA
CGCAACTCTA TGTCGGACGC ATCCCGCGAG CACAACGGCC GCTGGCTAAA TGAATTGTGG
GGGTTATACA CCAGCCAAGT GGAAGCCCAG CGCGAATTAC CTGTTGGTGC GGTAAATGAA
TACATCACTT CACTTCCCAA AGCCCTACCA AATTACAGTG GCACCGCTGC GGAGTTTGCC
CGCGATGCAG GCTTAGTAGA CGACGTTGTG TCCCGCGTGA AATTACGCGA GATATTCATC
GCCAAATACG GCGAAGGCAA GGAGAAGGGC CAACCCAATG GTGTCACCAT GGAGCACTAC
TTAGCGGATA CCTTTACGCC AAATTTAAAC ATGCATGACA ATATTGGCCT AATAGTCGCG
AGCGGTACCA TTTACGACGG CCGCCACCCC GAAGGCACTA TTGGCGGCGA TAGCATGGCA
GACTTACTGC GTGAAGCGCA AAAAGATAAC AGCCTTAAAG CGCTGGTTAT TCGAGTGGAT
AGCGGCGGCG GCAGCGCATT TGCCTCTGAA GTTATTCGCC AAGAAATTAG CAACCTAAAA
GCCAAGGGCA TTCCCATTTA TATTTCTATG GGCAGCCTAG CCGCCTCGGG TGGCTACTGG
ATTGCGACCG CCGCCGATGA AATATGGGCA ACGCCAGCTA CGCTTACCGG CTCTATTGGT
GTGTGGGGGC TGTACCCCAA CCTTACCGAC TCCCTCGATG CGCTGGGTAT ACACACAGAC
GGTATCGGCA CAACCGAACT GGCCGATGTG TTCCGTACCG ACCGCCCACT GTCTAACGCC
GCAGAAAAAG TACTGCAAAG TGGAGTAGAT AATATTTACA GCCGCTTTCT TTCGATTGTT
GCCGACGCTC GCGGCATAAG CGTAGAGCAA GTAAACGAGA TTGCGCAGGG GCGAGTGTGG
TCTGGCACCA CGGCAAAAGA ATTGGGGTTA GTTGATGAGC TAGGCGGCTT GAACGATGTG
ATAAAAGCCG CAGCAGAACG CCAACAACTT TCTGACTATA GAGTGAAGCT AATTGCACAG
CCTCTTTCTG CCAAAGAGCA GTTTTTACGC GCACTTACGC AAAACGCAAA AGCATTAACC
AGCAACATAG AAAACACCCT GCTCGATAAT GCGCCTGCAA TAAAATTGTT TAAAGACTTA
AACCAACAAT CCCTCTTCGA ACCACTCGCA ATACAAGGCA ACAAACAAGA ACTCAATGTT
TTAGCCCAAT GCGTAGCGTG CATCACGCCT TAA
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| Protein sequence | MKFIRGLWRG ISALRNFIFN ILFLIIFISI LVAMFSSPFA KIENGTALWL APSGDLVDQL
TYDPSPLALL DSSNRPNETL VSDLITAIDR AKTDSRISAL VLNLNHLTGG GVSKLTEVGD
AILRFKEGGK EVVAFGDNLS QQQYYLATYA DHIYLNDLGA VFVTGYGIYR NYWAEAADKL
KLKFHVFRVG DYKDAIEPFV RNSMSDASRE HNGRWLNELW GLYTSQVEAQ RELPVGAVNE
YITSLPKALP NYSGTAAEFA RDAGLVDDVV SRVKLREIFI AKYGEGKEKG QPNGVTMEHY
LADTFTPNLN MHDNIGLIVA SGTIYDGRHP EGTIGGDSMA DLLREAQKDN SLKALVIRVD
SGGGSAFASE VIRQEISNLK AKGIPIYISM GSLAASGGYW IATAADEIWA TPATLTGSIG
VWGLYPNLTD SLDALGIHTD GIGTTELADV FRTDRPLSNA AEKVLQSGVD NIYSRFLSIV
ADARGISVEQ VNEIAQGRVW SGTTAKELGL VDELGGLNDV IKAAAERQQL SDYRVKLIAQ
PLSAKEQFLR ALTQNAKALT SNIENTLLDN APAIKLFKDL NQQSLFEPLA IQGNKQELNV
LAQCVACITP
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