| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0896 |
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| Symbol | |
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| ID | 3965493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1159292 |
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| End bp | 1160011 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919958 |
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| Product | regulatory inactivation of DnaA Hda protein |
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| Protein accession | YP_526370 |
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| Protein GI | 90020543 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000881745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACGAAA AAACTTCCAC GCCGGTACAG CTTAGTCTTG GTGTTTCGTT GCGCGAAGAA
ACAACCTTCG CCAATTTTTT GGGCGCCGTT GGCAGCAACG CGCAGCCGGT TGCTGCGCTT
CAGCAATTTG CTGCTAACGA GGGCGAGCAA AATGTATTGG TGTGGGGCGC CCCCGGCTCG
GGTTTAACGC ACCTGTTACA GGCTGTGTGC CACCGTGCGT ACGAACACGG CTTGGCCGTA
CAGTATTTAC CTTTGCAAGA TATGGTTGGC TACGATGCGC AATCTATTTG CGACGGCTTA
GAGCAAATGC AGGTGGTATG CTTAGATGGC ATAGACCATA TTTGTGGTAT TAAAAGTTGG
GAGCAAGGCG TATTTCACTT GTACAACAAC TTGCGCGATG CGGGTCACCG TTTGCTTATC
GCATCGCACA CAAGCCCGCC GGCGTTGCCA TTAACACTGC CAGATTTAAA ATCGCGCGTA
TTAGGCAGCG TGCGTTACCA CGTAGAAAGT TTAAACGACC TGCAAAAGCA AGATGCTCTA
ATAGCACGCG CGGTCGCACG CGGCATGGAT ATGCCCGTCG AAGTAGCACG CTTTATTCTC
AACCGCGCTT CGCGCGATAC CAACGAGTTG TTCTACCTGC TAGACCAGCT AGATGACGCC
TCCTTACAAA AACAACGCAA GCTTACTGTG CCATTTGCCA AAGAGGTGTT GAATCTATAA
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| Protein sequence | MNEKTSTPVQ LSLGVSLREE TTFANFLGAV GSNAQPVAAL QQFAANEGEQ NVLVWGAPGS
GLTHLLQAVC HRAYEHGLAV QYLPLQDMVG YDAQSICDGL EQMQVVCLDG IDHICGIKSW
EQGVFHLYNN LRDAGHRLLI ASHTSPPALP LTLPDLKSRV LGSVRYHVES LNDLQKQDAL
IARAVARGMD MPVEVARFIL NRASRDTNEL FYLLDQLDDA SLQKQRKLTV PFAKEVLNL
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