Gene Sde_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0885 
Symbol 
ID3968819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1143788 
End bp1144369 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content43% 
IMG OID637919947 
ProductSecE subunit of protein translocation complex 
Protein accessionYP_526359 
Protein GI90020532 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.05445e-15 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.30572e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTTG AACTTCCTGC ATTGCCTTAT GCAAAAGACG CTCTAGCTCC ACACATTTCC 
GAAGAAACTT TAGAGTTTCA CTACGGCAAA CATCATCAAA CCTACGTAGA TAAGCTAAAC
GGTTTGGTGC CAGGCTCAGA ATTTGAAGGC AAAACCTTAG AAGAAATTAT CAAAACTTCT
TCTGGTGGTG TATTTAATAA CGCTGCACAA ATTTGGAACC ACACCTTTTA CTGGAACTGC
TTAAGCCCTA ACGGCGGCGG CGAAGCGACT GGCGCAGTTG GTGAAGCAAT TGTTGCTGCT
TTTGGTTCTT TCGAAAAGTT TAAAGAAGAG TTCACTAACT CTGCAATTAA CAACTTTGGT
TCTGCATGGA CGTGGTTGGT GAAAAAAGCA GATGGCACTG TTGCTATTGT AAACACCTCT
AACGCCGCTA CGCCATTAAC TGATAGCAGT GTTACGCCAC TGTTGACTGT TGATGTTTGG
GAGCACGCTT ACTACATCGA TTACCGCAAC AGCCGTCCTA ACTACTTAGG TGCGTTCTGG
AAATTGGTTA ACTGGGACTT TGCTAACCAA AACTTCGCAT AA
 
Protein sequence
MAFELPALPY AKDALAPHIS EETLEFHYGK HHQTYVDKLN GLVPGSEFEG KTLEEIIKTS 
SGGVFNNAAQ IWNHTFYWNC LSPNGGGEAT GAVGEAIVAA FGSFEKFKEE FTNSAINNFG
SAWTWLVKKA DGTVAIVNTS NAATPLTDSS VTPLLTVDVW EHAYYIDYRN SRPNYLGAFW
KLVNWDFANQ NFA