Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0882 |
Symbol | |
ID | 3968816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1140945 |
End bp | 1141421 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637919944 |
Product | biotin--acetyl-CoA-carboxylase ligase |
Protein accession | YP_526356 |
Protein GI | 90020529 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000346375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000146857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCGTATTT TGTTTTTGCT TTTTATCGTG GTGCCCATTA TCGAAATAAT GGTGCTTATT CAGGCCAGTA AAATCATTGG TGGCTGGGGT ACCGTTGGGC TTATTTTACT CACCGCGATG GTAGGTATGG CGTTGCTGCG CCGCCAAGGT GTTGCCACAT TGATGCGAGC TCGTCAGCGG ATGAATGAGG GCGCAATACC CGCCACAGAG ATGGTTGAGG GGATATTTTT AGCTGTGGGG GGCGCCTTGT TGCTCACCCC TGGCTTTGTG ACCGACGCGA TTGGCTTTTG TTGTCTTATT CCTGGTGTTC GCAAAGCGTT GATCGGTGGC GTGTTGGCGC GGGCGGTGAA TATTCAAACG TTTAGTCGCG CTCAGCACAC AAGTAAGCAA TCAGATACGT TCAACGGTCC GCAGGGTAAC CCTCGTGGCT CGCAATCTGA CGTGATTGAC GGTGAGTTTC GTCGAGAAGA CGATTAA
|
Protein sequence | MRILFLLFIV VPIIEIMVLI QASKIIGGWG TVGLILLTAM VGMALLRRQG VATLMRARQR MNEGAIPATE MVEGIFLAVG GALLLTPGFV TDAIGFCCLI PGVRKALIGG VLARAVNIQT FSRAQHTSKQ SDTFNGPQGN PRGSQSDVID GEFRREDD
|
| |