Gene Sde_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0868 
Symbol 
ID3968802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1124909 
End bp1125865 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content41% 
IMG OID637919930 
Productribonuclease BN 
Protein accessionYP_526342 
Protein GI90020515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGA ATCAAACTCT AGCAATCGTT GTGCCCTGCT ACAATGAAGA AAGCCAAATA 
GTTAAAGTGT TAAGCACACT GCCAGAATAT GTTGATAGAG TTTATATTAT TGACGACAAA
AGCCTCGACA AAACTGTAGA GGTAACTCAA AACTGGATCT CCACCAGTGC CACCCCTGAA
AAATATTTAC TTATAGAGCA CGAAATCAAT TCTGGCGTTG GCGCAGCGAT AGCAAGCGGT
TATAAACAAG CCGCTGCAGA GGAGGTTGAC GTAGCCGTAG TTATGGCCGG CGATGCGCAA
ATGGCACCTG AAGATCTTCC CGACATACTT GCCCCAGTAG TAGATGAAGG TTACGACTAC
TCCAAAGGCA ACCGTCTCTT TACTGGTGAC GCTTGGAATA TGATTCCGCG GGTTCGCTAT
ATTGGAAACT CCATACTATC ACTTCTTACG AAGATCGCCT CAGGCTATTG GCACATAGCA
GACTCTCAAT CGGGGTACAC AGCAATAAAC AAAAAGGCCC TCAAGACCAT TCAATGGGAT
GAGATGTACA AGCGCTACGG CCAACCGAAT GACCTACTTG TCAAACTAAA TATTTACAAC
TTTAAAGTTA AAGATGTACC AGTAGCTCCT GTTTATAATG TTGGCGAACA GTCTGGAGTA
AAACCCATTC GAATGATTCC TCGCTTAGCC TTTTTGTTAT TGAGATTATT CGTATACCGA
ATGAAAGAGA AATACATAAT TCGAGATTTT CACCCCCTAC TATTTTTCTA CCTATTTGGT
TTCATCTTAT TTATACCCGG CGCACTATTA GGCCTAGATT TAGTTATAAC CCGAATGCTT
GGCTATGCAG TTGCAGATAC TAGTGCACTG TTCGCTGCGT TTCTTAGTAT TATGGGTGTG
CAATTTTTAC TATTTGCCAT GTGGTTTGAC ATGGAAAGCA ATAAAAACTT AAAGTAA
 
Protein sequence
MYKNQTLAIV VPCYNEESQI VKVLSTLPEY VDRVYIIDDK SLDKTVEVTQ NWISTSATPE 
KYLLIEHEIN SGVGAAIASG YKQAAAEEVD VAVVMAGDAQ MAPEDLPDIL APVVDEGYDY
SKGNRLFTGD AWNMIPRVRY IGNSILSLLT KIASGYWHIA DSQSGYTAIN KKALKTIQWD
EMYKRYGQPN DLLVKLNIYN FKVKDVPVAP VYNVGEQSGV KPIRMIPRLA FLLLRLFVYR
MKEKYIIRDF HPLLFFYLFG FILFIPGALL GLDLVITRML GYAVADTSAL FAAFLSIMGV
QFLLFAMWFD MESNKNLK