Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0868 |
Symbol | |
ID | 3968802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1124909 |
End bp | 1125865 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919930 |
Product | ribonuclease BN |
Protein accession | YP_526342 |
Protein GI | 90020515 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAGA ATCAAACTCT AGCAATCGTT GTGCCCTGCT ACAATGAAGA AAGCCAAATA GTTAAAGTGT TAAGCACACT GCCAGAATAT GTTGATAGAG TTTATATTAT TGACGACAAA AGCCTCGACA AAACTGTAGA GGTAACTCAA AACTGGATCT CCACCAGTGC CACCCCTGAA AAATATTTAC TTATAGAGCA CGAAATCAAT TCTGGCGTTG GCGCAGCGAT AGCAAGCGGT TATAAACAAG CCGCTGCAGA GGAGGTTGAC GTAGCCGTAG TTATGGCCGG CGATGCGCAA ATGGCACCTG AAGATCTTCC CGACATACTT GCCCCAGTAG TAGATGAAGG TTACGACTAC TCCAAAGGCA ACCGTCTCTT TACTGGTGAC GCTTGGAATA TGATTCCGCG GGTTCGCTAT ATTGGAAACT CCATACTATC ACTTCTTACG AAGATCGCCT CAGGCTATTG GCACATAGCA GACTCTCAAT CGGGGTACAC AGCAATAAAC AAAAAGGCCC TCAAGACCAT TCAATGGGAT GAGATGTACA AGCGCTACGG CCAACCGAAT GACCTACTTG TCAAACTAAA TATTTACAAC TTTAAAGTTA AAGATGTACC AGTAGCTCCT GTTTATAATG TTGGCGAACA GTCTGGAGTA AAACCCATTC GAATGATTCC TCGCTTAGCC TTTTTGTTAT TGAGATTATT CGTATACCGA ATGAAAGAGA AATACATAAT TCGAGATTTT CACCCCCTAC TATTTTTCTA CCTATTTGGT TTCATCTTAT TTATACCCGG CGCACTATTA GGCCTAGATT TAGTTATAAC CCGAATGCTT GGCTATGCAG TTGCAGATAC TAGTGCACTG TTCGCTGCGT TTCTTAGTAT TATGGGTGTG CAATTTTTAC TATTTGCCAT GTGGTTTGAC ATGGAAAGCA ATAAAAACTT AAAGTAA
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Protein sequence | MYKNQTLAIV VPCYNEESQI VKVLSTLPEY VDRVYIIDDK SLDKTVEVTQ NWISTSATPE KYLLIEHEIN SGVGAAIASG YKQAAAEEVD VAVVMAGDAQ MAPEDLPDIL APVVDEGYDY SKGNRLFTGD AWNMIPRVRY IGNSILSLLT KIASGYWHIA DSQSGYTAIN KKALKTIQWD EMYKRYGQPN DLLVKLNIYN FKVKDVPVAP VYNVGEQSGV KPIRMIPRLA FLLLRLFVYR MKEKYIIRDF HPLLFFYLFG FILFIPGALL GLDLVITRML GYAVADTSAL FAAFLSIMGV QFLLFAMWFD MESNKNLK
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