| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0861 |
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| Symbol | |
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| ID | 3965210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1116889 |
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| End bp | 1117785 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919923 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_526335 |
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| Protein GI | 90020508 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCA CTCATTTTTC AAACTTACAA ATTGCCTACA TCTATTTCGT CGTCGCCATT
ATCGGCGCCA CAATTGGTAG CTTTTTAAAC GTTGTTATCT ACCGGCTCCC GCTCTCGTTA
ATGAAAGGCT GGGAGCAGGA GTGCAAAGAG TTTCTGGCTT CTAAAGGCGA AGCCGAGACT
CCAGCACAAA ACGAGCAAGA GTCAGAACCC TTCAATATTG CCTTTCCTGC GTCACACTGC
CCTAACTGCA AGGCTCCTGT TAAGGCCTGG CAAAACATTC CCATTATTAG TTACTTACTG
CTAAAAGGTA AGTGCGCTGC GTGTAATGTA AAAATATCGC TGCGCTACCC TATAGTTGAA
TTCGTTACTT CGGTATTAAG TATTTGGGTT GTTTACAGCT TGGGGCTAAC GGTAGAAGCA
GGCTTGGTAC TGCTATTAAC ATGGAGCCTG CTGGTTTTAA CGTTAATTGA TGTAGACCAC
CAACTACTGC CAGACAACAT TACCCTACCG CTTTTGTGGC TGGGGCTACT TGCGAATACT
CAAGGGCATT TTACCGACCT GCAAAGTGCA GTCATTGGTG CTGTTGCAGG CTACCTAGTG
CTTTGGAGCG TGTTCTGGTT GTTTAAGCTT GTAACCGGCA AAGAGGGCAT GGGCTTTGGG
GATTTCAAGT TACTGGCGGC ACTTGGCGCT TGGATGGGCT GGCAAGCTCT GCCGGTAATC
ATTATTTTGT CGTCTGCGGT GGGCGCTATT ATTGGTATTG GCGGCATACT TATTTTCGGC
AAAGATAAAA ACAAGCCTAT TCCTTTCGGC CCATATTTAG CCATAGCGGG TTGGATAGCC
TTCTTCTGGG GCGACGCCAT TACCGGCGCT TACCTTTCCT ACGCCACCGG CCAATAA
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| Protein sequence | MDFTHFSNLQ IAYIYFVVAI IGATIGSFLN VVIYRLPLSL MKGWEQECKE FLASKGEAET
PAQNEQESEP FNIAFPASHC PNCKAPVKAW QNIPIISYLL LKGKCAACNV KISLRYPIVE
FVTSVLSIWV VYSLGLTVEA GLVLLLTWSL LVLTLIDVDH QLLPDNITLP LLWLGLLANT
QGHFTDLQSA VIGAVAGYLV LWSVFWLFKL VTGKEGMGFG DFKLLAALGA WMGWQALPVI
IILSSAVGAI IGIGGILIFG KDKNKPIPFG PYLAIAGWIA FFWGDAITGA YLSYATGQ
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