| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0855 |
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| Symbol | |
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| ID | 3965204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1110048 |
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| End bp | 1110980 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919917 |
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| Product | Fe-S type hydro-lyases tartrate/fumarate alpha region |
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| Protein accession | YP_526329 |
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| Protein GI | 90020502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000487918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TCGTCGTAAG TAAACGTCAC GGAAACACTC GCAGCTTTAC GCTGGGAGCG
TGGAAGCGTG CGCTTATCTC AGCCTGTATA TTGGGGCTGC CGGTGGGTAT AACGCTAGGC
GCCTTGAAGT ACTTTGACAC CGAGTCCGAC TCCGAATTTC TCAACCCAGG ATCTCGTCAA
GCATGGGTAG CCGCGCTAAA CGAGCAAGCT CAGCAAGTAG AGCAAGCGCG ACTGCAAACA
GAGCAAAAAC TCGCGGCATT AACCATGCGA GTGGCCGAAC TGCAGGCTAG GCTGGTTAGG
ATTGATGCAC TGGGTGAGCG ACTAACCGGT ATGGCTCACC TCGATAACGG TGAGTTCGAT
TTTAGTCAGA TGCCAGCTCT AGGTGGCCCC GAGCAGGCAA TAGAAGAAGA ACACGTTACC
GCCCCCGATT TTCAAGCTAC CCTCGATCAG CTTGCCTCTC AAATAGAAGA CCGCCAACAG
CAGCTTAATA CCCTCGAAGC ACTGCTTGCC AACCGCAAGT TACAAGATGA AGTGTTTTTG
GCTGGGCGCC CTATTAATAA AGGGTGGATG TCCTCCCGTT TTGGCCGCCG CACAGACCCG
TTTACAGGGC GTGTAGCATG GCATGAAGGT GTCGATTTTG CGGGTAAAGA AGGCAGCGAT
ATTGTCGCGG TGGCTTCTGG GGTAGTTACT TGGTCTAGCG AGCGCAGCGG TTACGGTAAC
TTGGTAGAAA TTAACCATGG TAACGGCTAT AAAACCCGTT ACGGCCACTG CAAAGAAAAT
CTTGTTAAAG TGGGCGATGT TGTTAAGAAA GGCCAAGTTA TAGCTTTAAT GGGTTCAAGT
GGCCGTTCAA CAGGCCCCCA TGTACATTTC GAAGTCTACA AGCACGGTCG CGCAGTCGAC
CCATCTACTT ATATTCATCG GGCAAGTCGT TAA
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| Protein sequence | MKIIVVSKRH GNTRSFTLGA WKRALISACI LGLPVGITLG ALKYFDTESD SEFLNPGSRQ
AWVAALNEQA QQVEQARLQT EQKLAALTMR VAELQARLVR IDALGERLTG MAHLDNGEFD
FSQMPALGGP EQAIEEEHVT APDFQATLDQ LASQIEDRQQ QLNTLEALLA NRKLQDEVFL
AGRPINKGWM SSRFGRRTDP FTGRVAWHEG VDFAGKEGSD IVAVASGVVT WSSERSGYGN
LVEINHGNGY KTRYGHCKEN LVKVGDVVKK GQVIALMGSS GRSTGPHVHF EVYKHGRAVD
PSTYIHRASR
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