| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0846 |
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| Symbol | |
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| ID | 3965803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1098911 |
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| End bp | 1100281 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919908 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_526320 |
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| Protein GI | 90020493 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATT TAATAGCAAC AGACAACCCG ATAGTAGTGG TAGGCATGGG CCTTACCGGG
CTATCGGTTG CGCGCTATTT GGCCAACAAA GGCGCTAACT TCTTTTTATT AGACACGCGC
AAAGATCTAC CCAAGTCAAC TTGGCAGCAA GTTGCAGAGC TACAAGCCAA ATGCCCTTCA
ATGAAGGTAG ATAACGGTAG CTTAGATGTG GAGTTGTTAA CCAGCGCCAA GCAAATTGTG
TTATCGCCAG GTGTGCCTTT GGCAACCCCA GAGATACAGC AGGCCAAAGC GGCAGGCGTA
GAAATTATTG GTGATATCGA TCTGTTTTTG GCTGAGCGCA AAGCGCCGGT TGTTGGTATT
ACTGGCTCCA ACGGTAAAAG CACCGTAACC ACATTGGTTG GCTTGGCTGC AGAAAATGCA
GGTATGAATG TAGCCGTAGG TGGCAACATC GGCGTACCGG TTTTAGATTT GTTAGCTGAT
GCCGACGTTG AGCTGTATGT GCTTGAGCTT TCTAGCTTTC AGTTAGAGTC GGTTAAGCGC
GCGCAGTTAG ATGTGGCATG TGTGCTAAAT GTATCGCCCG ATCATATGGA TCGCTACCCG
TCGCTTGCGC ACTACTGCCA AGCGAAGCAG CGTATTTATT TTGGTGCGAA GAAAATTGTA
TATAACTTGG AAGATACATT AACAATTCCG CCAGTAATGG CTGGTGTTGA GCGTTACGGC
TTCTCTAGTA AGAAAGCCGT TGAAGAAAAC GAAAAGCATG TACTGCTCAA TAACGACACC
AACGCATTGA GCCTAAATGG GCAGGATGTT TTTTCTGTTG CTGATATTAA AATAGCTGGC
GCGCACAATT TAAAAAATGC ACTTGCTGCT TTGGCCATTT GCGACGCAGC AAACATCCCG
TTCGCCGGCT TGAAGCAAGC ACTACAGGAA TTTGAGGGGT TGCCTCACCG CTGTCAGTGG
GTGGCCAACA AAAATGGCGT TACTTATATA AACGATTCCA AGGCGACCAA CATCGGTTCT
GCCCAAGCGG CTATAGAAGG GCTGGCGGGT CAGTTTAAAA ATATCGTACT TATCGCCGGT
GGCGATGGCA AGGGCGCAGA TTTTTCTAGC CTAGGTAAAG TAATAAACCA ATATGTTTCG
GCGGTTGTGT TAATTGGTGT AGATGCCCCC AAAATACAAG CAGTGGTAGA CCCGCAAGTT
ATGTGTGTAA AAGCACAAAC TTTAAATGCA GCGGTTAAAC AGGCGGCACT ATTGGCTAAA
TCTGGTGACT TAGTGTTGTT GTCGCCAGCG TGTGCAAGCT TAGATATGTT TGCTAACTAC
GAAGCGCGCG GCCATGAGTT TGCGTTAACA GTTGCGGAGG TGAGTGCGTG A
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| Protein sequence | MANLIATDNP IVVVGMGLTG LSVARYLANK GANFFLLDTR KDLPKSTWQQ VAELQAKCPS
MKVDNGSLDV ELLTSAKQIV LSPGVPLATP EIQQAKAAGV EIIGDIDLFL AERKAPVVGI
TGSNGKSTVT TLVGLAAENA GMNVAVGGNI GVPVLDLLAD ADVELYVLEL SSFQLESVKR
AQLDVACVLN VSPDHMDRYP SLAHYCQAKQ RIYFGAKKIV YNLEDTLTIP PVMAGVERYG
FSSKKAVEEN EKHVLLNNDT NALSLNGQDV FSVADIKIAG AHNLKNALAA LAICDAANIP
FAGLKQALQE FEGLPHRCQW VANKNGVTYI NDSKATNIGS AQAAIEGLAG QFKNIVLIAG
GDGKGADFSS LGKVINQYVS AVVLIGVDAP KIQAVVDPQV MCVKAQTLNA AVKQAALLAK
SGDLVLLSPA CASLDMFANY EARGHEFALT VAEVSA
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