Gene Sde_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0836 
Symbol 
ID3965792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1087509 
End bp1087862 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content50% 
IMG OID637919898 
Producthypothetical protein 
Protein accessionYP_526310 
Protein GI90020483 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0132349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CACAAACATT TGTACCCGAA CCCGTACAAG TGACGGAAAA TGCGCTCGCC 
AAAGTTAAGG CGCTTATCGA GGAAGAAGGC AACCCAGACC TGAAGTTACG TGTATTTGTT
ACCGGCGGCG GCTGTTCTGG GTTTCAATAC GGCTTCGCCT TCGATGAAGC TTGCGCAGAA
GACGATGCCA AAATAGAGCG CGATGGGGTG ACTGTAGTGG TAGATGCTAT GAGCTACCCC
TATTTAGTTG GCGCTCAAGT TGATTACGAA GAGGGCCTTA AGGGGTCTAA ATTTGTAGTA
GCCAACCCCA ACGCCTCCAC AACCTGTGGA TGCGGTTCGT CATTTTCCAT CTAA
 
Protein sequence
MSAPQTFVPE PVQVTENALA KVKALIEEEG NPDLKLRVFV TGGGCSGFQY GFAFDEACAE 
DDAKIERDGV TVVVDAMSYP YLVGAQVDYE EGLKGSKFVV ANPNASTTCG CGSSFSI